CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05373	Soybean	nucleus	84.71	83.4
KRH48495	Soybean	nucleus	77.65	72.79
KRH39174	Soybean	nucleus	77.25	72.16
KRH41647	Soybean	nucleus	60.39	61.11
KRH60345	Soybean	nucleus	53.73	55.69
VIT_17s0000g03580.t01	Wine grape	nucleus	45.88	44.15
GSMUA_Achr11P...	Banana	nucleus	29.8	42.94
CDY45873	Canola	nucleus	32.94	42.21
Bra025910.1-P	Field mustard	nucleus	40.78	41.94
PGSC0003DMT400014656	Potato	nucleus	44.71	41.3
AT1G73830.1	Thale cress	nucleus	41.57	40.61
CDY65027	Canola	nucleus	41.18	39.92
CDY26165	Canola	nucleus	41.18	39.92
Solyc03g119390.2.1	Tomato	nucleus	41.57	39.26
AT1G18400.1	Thale cress	nucleus	40.0	39.23
GSMUA_Achr10P...	Banana	nucleus	29.02	38.34
Solyc12g036470.1.1	Tomato	nucleus	40.78	38.24
CDX82053	Canola	cytosol	17.25	37.61
PGSC0003DMT400013766	Potato	nucleus	40.0	37.5
CDX73020	Canola	nucleus	38.43	37.4
GSMUA_Achr1P21010_001	Banana	nucleus	38.82	37.08
Bra015960.1-P	Field mustard	nucleus	38.04	37.02
CDY67050	Canola	nucleus	38.04	37.02
GSMUA_AchrUn_...	Banana	nucleus	36.08	33.95
GSMUA_Achr9P00560_001	Banana	nucleus	33.33	33.6
CDY47737	Canola	nucleus	34.51	33.59
Bra008113.1-P	Field mustard	nucleus	34.51	33.59
KRH05195	Soybean	cytosol	10.2	29.21
GSMUA_Achr6P09740_001	Banana	nucleus	25.1	27.83

Protein Annotations

EMBL:ACUP02008622	EnsemblPlants:KRH15645	EnsemblPlantsGene:GLYMA_14G102200	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF296	PFscan:PS50888	ProteinID:KRH15645	ProteinID:KRH15645.1	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0006EDE781	UniProt:A0A0R0GBI9	MapMan:15.5.32	:	:

Description

hypothetical protein

Coordinates

chr14:-:10100120..10101835

Molecular Weight (calculated)

29018.5 Da

IEP (calculated)

5.774

GRAVY (calculated)

-0.529

Length

255 amino acids

Sequence
(BLAST)

001: MAEFTENLQR IGPSSFPFLD IDPSMELLNQ FIGMNQLYVL DNSNLMPYFS FDTFLLGPQE PEFPGNLEED FPFLFNHVNH NNALPISLPI FQAENEIHEG
101: KKRKSMDLPE TSSVNSTPKV SESGNKFKHS SGRGKRVKNN VTEEEKAKEV VNVRARSGQA TDSRNLAERV RRGKINEKLR YLQNIVPGCY KTMGMAVMLD
201: EIINYFLSLK LTAPSTFYDF NSEIDALETM QRARASEAKE LGMYKREGYG GVSFF

Best Arabidopsis Sequence Match ( AT1G18400.1 )
(BLAST)

001: MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS PVFHLSTWSL

Arabidopsis Description

BEE1Transcription factor BEE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ13]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.