Factsheet for Bra008113.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47737	Canola	nucleus	99.24	99.24
Bra015960.1-P	Field mustard	nucleus	67.56	67.56
AT1G73830.1	Thale cress	nucleus	61.45	61.69
Bra025910.1-P	Field mustard	nucleus	49.62	52.42
KRH41647	Soybean	nucleus	39.69	41.27
GSMUA_Achr10P...	Banana	nucleus	30.15	40.93
PGSC0003DMT400013766	Potato	nucleus	41.98	40.44
Solyc03g119390.2.1	Tomato	nucleus	41.22	40.0
KRH60345	Soybean	nucleus	37.4	39.84
Bra010993.1-P	Field mustard	nucleus	33.97	39.73
GSMUA_Achr11P...	Banana	nucleus	26.72	39.55
Solyc12g036470.1.1	Tomato	nucleus	40.84	39.34
VIT_17s0000g03580.t01	Wine grape	nucleus	38.55	38.11
PGSC0003DMT400014656	Potato	nucleus	39.69	37.68
KRH39174	Soybean	nucleus	38.93	37.36
KRH48495	Soybean	nucleus	38.55	37.13
GSMUA_Achr1P21010_001	Banana	nucleus	37.02	36.33
GSMUA_Achr9P00560_001	Banana	nucleus	33.97	35.18
GSMUA_Achr6P09740_001	Banana	nucleus	30.53	34.78
KRH15645	Soybean	nucleus	33.59	34.51
KRH05373	Soybean	nucleus	32.44	32.82
GSMUA_AchrUn_...	Banana	nucleus	30.92	29.89
Bra017765.1-P	Field mustard	cytosol, extracellular, nucleus, plastid	19.08	18.66
Bra010558.1-P	Field mustard	nucleus	20.23	17.67
Bra037226.1-P	Field mustard	nucleus	20.61	16.31
Bra024474.1-P	Field mustard	nucleus	20.23	15.82
Bra039618.1-P	Field mustard	nucleus	20.23	15.73
Zm00001d019127_P001	Maize	plastid	16.79	14.38

Protein Annotations

EnsemblPlants:Bra008113.1	EnsemblPlants:Bra008113.1-P	EnsemblPlantsGene:Bra008113	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF296	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000254577F	UniProt:M4CV67	MapMan:15.5.32	MapMan:26.1.2.1.2	:

Description

AT1G73830 (E=1e-091) BEE3 | BEE3 (BR ENHANCED EXPRESSION 3); DNA binding / transcription factor

Coordinates

chrA02:+:13200607..13201896

Molecular Weight (calculated)

29357.2 Da

IEP (calculated)

7.761

GRAVY (calculated)

-0.729

Length

262 amino acids

Sequence
(BLAST)

001: MANLSSDFQT FDPITQLAEL NNTLNPFQTM FASPFSSSLD SLFFHHQQHQ QFPEHFPGKS PENNGFHQGI LLPNYNTHNN DDSSSGIDTK KRKTLMESVS
101: TSENSVSDQT LSTSSAQVST NGTKNSSLRR GKMSKNREEE KERVVVHVRA KRGQATDSHS LAERVRRGKI NERLKCLKDI VPGCYKAMGM ATMLDEIINY
201: VQSLQNQVEF LSMKLTAASS YYDFNSEADA VDSMQKAKAR EAVEMGQGRD GSRVFHSSSW TL

Best Arabidopsis Sequence Match ( AT1G73830.1 )
(BLAST)

001: MANLSSDFQT FTMDDPIRQL AELSNTLHHF QTFPPPFSSS LDSLFFHNQF PDHFPGKSLE NNFHQGIFFP SNIQNNEESS SQFDTKKRKS LMEAVSTSEN
101: SVSDQTLSTS SAQVSINGNI STKNNSSRRG KRSKNREEEK EREVVHVRAR RGQATDSHSI AERVRRGKIN ERLKCLQDIV PGCYKTMGMA TMLDEIINYV
201: QSLQNQVEFL SMKLTAASSY YDFNSETDAV ESMQKAKARE AVEMGQGRDG SSVFHSSSWT L

Arabidopsis Description

BEE3Transcription factor BEE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.