Factsheet for Bra025910.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26165	Canola	nucleus	100.0	94.3
CDY65027	Canola	nucleus	97.98	92.4
AT1G18400.1	Thale cress	nucleus	67.74	64.62
Bra015960.1-P	Field mustard	nucleus	56.85	53.82
Bra008113.1-P	Field mustard	nucleus	52.42	49.62
GSMUA_Achr10P...	Banana	nucleus	35.48	45.6
KRH41647	Soybean	nucleus	45.16	44.44
Solyc12g036470.1.1	Tomato	nucleus	47.58	43.38
KRH60345	Soybean	nucleus	42.74	43.09
KRH48495	Soybean	nucleus	46.77	42.65
Solyc03g119390.2.1	Tomato	nucleus	46.37	42.59
KRH39174	Soybean	nucleus	46.77	42.49
GSMUA_Achr11P...	Banana	nucleus	29.84	41.81
PGSC0003DMT400014656	Potato	nucleus	46.37	41.67
PGSC0003DMT400013766	Potato	nucleus	45.16	41.18
VIT_17s0000g03580.t01	Wine grape	nucleus	43.95	41.13
KRH15645	Soybean	nucleus	41.94	40.78
KRH05373	Soybean	nucleus	41.13	39.38
Bra010993.1-P	Field mustard	nucleus	35.08	38.84
GSMUA_Achr1P21010_001	Banana	nucleus	41.53	38.58
GSMUA_Achr6P09740_001	Banana	nucleus	34.27	36.96
GSMUA_Achr9P00560_001	Banana	nucleus	35.08	34.39
GSMUA_AchrUn_...	Banana	nucleus	33.87	31.0
Bra017765.1-P	Field mustard	cytosol, extracellular, nucleus, plastid	21.77	20.15
Bra010558.1-P	Field mustard	nucleus	21.77	18.0
Zm00001d019127_P001	Maize	plastid	19.35	15.69
Bra039618.1-P	Field mustard	nucleus	20.97	15.43
Bra037226.1-P	Field mustard	nucleus	20.56	15.41
Bra024474.1-P	Field mustard	nucleus	19.76	14.63

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EnsemblPlantsGene:Bra025910	EnsemblPlants:Bra025910.1	EnsemblPlants:Bra025910.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009987	GO:GO:0046983	GO:GO:1902448
InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	UniProt:M4EAV1	PFAM:PF00010	PFscan:PS50888
PANTHER:PTHR12565	PANTHER:PTHR12565:SF296	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000253F43F	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

AT1G18400 (E=4e-082) BEE1 | BEE1 (BR Enhanced Expression 1); transcription factor

Coordinates

chrA06:+:7061049..7062462

Molecular Weight (calculated)

28051.0 Da

IEP (calculated)

8.333

GRAVY (calculated)

-0.762

Length

248 amino acids

Sequence
(BLAST)

001: MDIYSSMTQA ADLNNNNNIS SNLQFQTFPP FSTCLDSLFL HHRHPQQLLD LPGKYPGSDN NLSTTSTLYH SSHNNVDETK KRKALLQPLS SSENSSVSDQ
101: LNINTTETGC SRRGKRLKKK NQEEEKEREV VHVRARRGQA TDSHSLAERV RRGKINERLR CLQDIVPGCY KSMGMATMLD EIINYVQSLQ NQVELLSMKL
201: TAASSFYDFN SETDAVDSMQ RAKAREAVEM GRQTRDGNPV LHLSAWSL

Best Arabidopsis Sequence Match ( AT1G18400.1 )
(BLAST)

001: MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS PVFHLSTWSL

Arabidopsis Description

BEE1Transcription factor BEE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ13]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.