Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 25.49 | 33.68 |
| GSMUA_Achr6P09740_001 | Banana | nucleus | 25.49 | 28.26 |
| GSMUA_Achr11P... | Banana | nucleus | 18.43 | 26.55 |
| GSMUA_Achr9P00560_001 | Banana | nucleus | 24.71 | 24.9 |
| GSMUA_Achr1P21010_001 | Banana | nucleus | 25.49 | 24.34 |
| GSMUA_Achr10P... | Banana | nucleus | 22.75 | 23.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.92 | 22.51 |
| Zm00001d019127_P001 | Maize | plastid | 16.86 | 14.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P23700_001 | EnsemblPlants:GSMUA_Achr5T23700_001 | EnsemblPlantsGene:GSMUA_Achr5G23700_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000296184F | UniProt:M0T145 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G23700_001]
Coordinates
chr5:-:25351289..25353231
Molecular Weight (calculated)
27767.1 Da
IEP (calculated)
7.728
GRAVY (calculated)
-0.346
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDLSCWALS PRKPSHISFI YIACERDDEL PAFSFHLKPS ISCSYGGLLC QFPELNDTAM DHPSSGLMCY SDENSSSHQT DELLTAIVGN LTSLLPATAA
101: SAISFASNNS ALSGTATKSA EANPKKKKKK KKKKNEDMPK EVVHVRARRG QATNSHSLAE RARREKINER MSCLQGLVPG CHKAMGIAAM LDEIINYVQS
201: LQNQVQMLSM KLAVCESSLE RMQAAATLQE EPNSRFAQDE VGGGCGAAFV SPNHF
101: SAISFASNNS ALSGTATKSA EANPKKKKKK KKKKNEDMPK EVVHVRARRG QATNSHSLAE RARREKINER MSCLQGLVPG CHKAMGIAAM LDEIINYVQS
201: LQNQVQMLSM KLAVCESSLE RMQAAATLQE EPNSRFAQDE VGGGCGAAFV SPNHF
001: MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQVLEHSNNV FQFLR
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQVLEHSNNV FQFLR
Arabidopsis Description
BEE1Transcription factor BEE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ13]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.