Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 1
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P29210_001 Banana nucleus 95.95 54.61
VIT_13s0067g03600.t01 Wine grape nucleus 93.06 47.92
GSMUA_Achr6P15450_001 Banana nucleus 89.02 45.7
GSMUA_Achr10P... Banana nucleus 83.24 44.31
GSMUA_Achr1P06160_001 Banana nucleus 31.79 22.09
GSMUA_Achr11P... Banana nucleus 38.15 19.08
GSMUA_Achr8P10150_001 Banana nucleus 38.15 18.86
Protein Annotations
MapMan:16.4.6.5Gene3D:3.30.70.330Gene3D:4.10.60.10GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0005488GO:GO:0008270EnsemblPlantsGene:GSMUA_Achr11G23920_001EnsemblPlants:GSMUA_Achr11P23920_001EnsemblPlants:GSMUA_Achr11T23920_001InterPro:IPR000504
InterPro:IPR001878InterPro:IPR012677UniProt:M0RUX2InterPro:Nucleotide-bd_a/b_plait_sfPFAM:PF00076PFAM:PF00098
PFscan:PS50102PFscan:PS50158PANTHER:PTHR23147PANTHER:PTHR23147:SF39InterPro:RBD_domain_sfInterPro:RRM_dom
SMART:SM00343SMART:SM00360SUPFAM:SSF54928SUPFAM:SSF57756UniParc:UPI000294FDEAInterPro:Znf_CCHC
InterPro:Znf_CCHC_sfSEG:seg::::
Description
splicing factor, arginine/serine-rich, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G23920_001]
Coordinates
chr11:+:23652164..23654564
Molecular Weight (calculated)
19968.2 Da
IEP (calculated)
10.248
GRAVY (calculated)
-1.250
Length
173 amino acids
Sequence
(BLAST)
001: MPRYDDRYGG TRLYVGHLSS RTRSRDLEDL FSRYGRVRDV DMKHDYAFIE FSDPRDADDA RYSLNGREFD GSRIIVEFAK GIPRGSGGSR EYLGRGPPPG
101: SGRCFNCGID GHWARDCKAG DWKNKCYRCG ERGHIERNCH NSPKTLKRGR SYSRSPSPRH GRSRSYSRSR SYR
Best Arabidopsis Sequence Match ( AT2G37340.1 )
(BLAST)
001: MPRYDDRYGN TRLYVGRLSS RTRTRDLERL FSRYGRVRDV DMKRDYAFVE FGDPRDADDA RHYLDGRDFD GSRITVEFSR GAPRGSRDFD SRGPPPGAGR
101: CFNCGVDGHW ARDCTAGDWK NKCYRCGERG HIERNCKNSP KKLRRSGSYS RSPVRSRSPR RRRSPSRSLS RSRSYSRSRS PVRRRERSVE ERSRSPKRMD
201: DSLSPRARDR SPVLDDEGSP KIIDGSPPPS PKLQKEVGSD RDGGSPQDNG RNSVVSPVVG AGGDSSKEDR SPVDDDYEPN RTSPRGSESP
Arabidopsis Description
RS2Z33Serine/arginine-rich splicing factor RS2Z33 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYA5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.