Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0105g00220.t01 | Wine grape | cytosol | 53.95 | 43.41 |
| KRH68010 | Soybean | cytosol | 53.39 | 42.95 |
| Solyc01g007060.2.1 | Tomato | cytosol | 51.98 | 41.82 |
| Zm00001d021387_P001 | Maize | cytosol | 51.41 | 41.74 |
| Os07t0668800-01 | Rice | cytosol | 51.13 | 41.23 |
| KRG96258 | Soybean | mitochondrion | 53.39 | 41.0 |
| PGSC0003DMT400055044 | Potato | mitochondrion | 51.69 | 38.12 |
| AT3G05675.1 | Thale cress | cytosol | 47.46 | 38.1 |
| CDY14655 | Canola | cytosol | 46.89 | 37.73 |
| TraesCS5B01G362800.1 | Wheat | cytosol, mitochondrion, nucleus | 47.74 | 36.42 |
| TraesCS5D01G369700.1 | Wheat | cytosol, mitochondrion, nucleus | 46.61 | 36.26 |
| EER99337 | Sorghum | cytosol | 51.13 | 35.98 |
| TraesCS5A01G360300.1 | Wheat | cytosol | 46.61 | 35.56 |
| HORVU5Hr1G088840.1 | Barley | cytosol | 37.29 | 28.7 |
| CDY14657 | Canola | plastid | 8.76 | 24.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P23410_001 | EnsemblPlants:GSMUA_Achr1T23410_001 | EnsemblPlantsGene:GSMUA_Achr1G23410_001 | InterPro:BTB/POZ_dom_prot | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF7 |
| SEG:seg | UniParc:UPI0002957C94 | UniProt:M0S2E8 | MapMan:35.1 | : | : |
Description
Putative H-BTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G23410_001]
Coordinates
chr1:+:17759712..17761415
Molecular Weight (calculated)
40629.6 Da
IEP (calculated)
4.830
GRAVY (calculated)
-0.212
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPLILSELR RPKNSLVTTP NSFGDRTTSD VVVRLRTHEG RDNWFYCHSE ILIEKSKYFA EQLEFDFHVI AFRLLYVTEP QTRYGVRNTL GIFQVAVRLG
101: CHQLAHDCID YLESVPWEET EEEEMLRIIP HLGSQYEEIL ARLQPVNPIS SSAQDQLEYM LTEDDDAPLL TLDNEDIKIE ILTKMEMMKH LVHYWLEASL
201: NIVRVTEKLN QDDHMPETRL KVIEVTSKVL DAVGFGHVIV ATAMRLGLVN VWLPFVQRTR PLLEQANSDS EGGSSLQIDS EIWQGLESAF ISILLTLPSV
301: SQAEILAGWL RSEHARYPDL TEAFEAWCYR SKIAKRRLAL SDGISNRTSS QVPP
101: CHQLAHDCID YLESVPWEET EEEEMLRIIP HLGSQYEEIL ARLQPVNPIS SSAQDQLEYM LTEDDDAPLL TLDNEDIKIE ILTKMEMMKH LVHYWLEASL
201: NIVRVTEKLN QDDHMPETRL KVIEVTSKVL DAVGFGHVIV ATAMRLGLVN VWLPFVQRTR PLLEQANSDS EGGSSLQIDS EIWQGLESAF ISILLTLPSV
301: SQAEILAGWL RSEHARYPDL TEAFEAWCYR SKIAKRRLAL SDGISNRTSS QVPP
001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
Arabidopsis Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.