CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G05675.1	Thale cress	cytosol	79.77	79.59
KRH68010	Soybean	cytosol	56.59	56.59
VIT_08s0105g00220.t01	Wine grape	cytosol	55.0	55.0
KRG96258	Soybean	mitochondrion	56.59	54.01
Solyc01g007060.2.1	Tomato	cytosol	53.64	53.64
PGSC0003DMT400055044	Potato	mitochondrion	54.09	49.58
GSMUA_Achr1P23410_001	Banana	cytosol	37.73	46.89
Os07t0668800-01	Rice	cytosol	44.77	44.87
Zm00001d021387_P001	Maize	cytosol	43.41	43.81
CDY14657	Canola	plastid	11.82	40.62
TraesCS5D01G369700.1	Wheat	cytosol, mitochondrion, nucleus	41.36	40.0
TraesCS5A01G360300.1	Wheat	cytosol	41.36	39.22
TraesCS5B01G362800.1	Wheat	cytosol, mitochondrion, nucleus	40.91	38.79
EER99337	Sorghum	cytosol	43.18	37.77
HORVU5Hr1G088840.1	Barley	cytosol	35.68	34.13
CDX86843	Canola	cytosol	20.23	33.33
CDY71004	Canola	cytosol, peroxisome, plastid	20.0	32.59

Protein Annotations

EnsemblPlants:CDY14655	EnsemblPlantsGene:GSBRNA2T00084434001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060	PANTHER:PTHR31060:SF7
PFscan:PS50097	ProteinID:CDY14655	ProteinID:CDY14655.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0004EEFC88
UniProt:A0A078FJQ1	MapMan:35.1	:	:	:	:

Description

BnaC05g19120DBnaC05g19120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJQ1]

Coordinates

chrLK032046:-:21597..23798

Molecular Weight (calculated)

49681.4 Da

IEP (calculated)

4.310

GRAVY (calculated)

-0.143

Length

440 amino acids

Sequence
(BLAST)

001: MEPPDDQQAE ASYTFGDRST SDIVVRLRNE EGRDDWIYCH SKILTEKSRY FSDRLSDKWP TCKILDSRYC VEVICQESDY DHHINLLRLL YVVGSGDDDV
101: PEDHHLCHNV KSALGILCVA KDLDCPLVVT ACVNYLEAVP WEEGEEEEML RVVPMIGPEA EPVLARLQPV DQSAVTGIFS SALRFATSSP PLPLCDIKAS
201: AQEQIEYMIT EDDDAPLLIA DEVIKLEVKE CVNSLFVRFF QCLEEVSSKN GLSLKMVVSD LSWAFQILTK MEMVRDFVVT WVETSEKLVK VVEAMETVAE
301: TVEIRVKVTE VTSKVVEAIG YGTVILPTMK RLQMVKLWLP FVRETKPRVD SAGSNQEEDK EEGVRCKIDG EIWQALESSF VSIILALPSS DQAEILTEWL
401: SKNGVYPDLT EAFEVWCYRS KVAKRRLGLL GGEEDGKDMS

Best Arabidopsis Sequence Match ( AT3G05675.2 )
(BLAST)

001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S

Arabidopsis Description

BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.