CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86843	Canola	cytosol	94.07	95.13
AT4G10800.1	Thale cress	cytosol	83.33	79.51
KRH62719	Soybean	cytosol	47.04	44.25
KRH56238	Soybean	cytosol	46.67	43.6
Solyc01g005670.2.1	Tomato	cytosol	44.81	41.87
PGSC0003DMT400081827	Potato	cytosol	44.44	41.1
VIT_02s0025g02270.t01	Wine grape	cytosol	52.59	32.95
Os06t0129200-01	Rice	cytosol	44.44	27.71
EER89111	Sorghum	cytosol	43.33	27.08
Zm00001d045494_P001	Maize	cytosol	42.96	26.73
TraesCS7A01G061100.1	Wheat	cytosol	41.48	25.57
TraesCS4A01G428700.1	Wheat	cytosol	41.48	25.51
HORVU7Hr1G011170.1	Barley	cytosol	40.37	24.94
HORVU7Hr1G011320.1	Barley	cytosol	40.37	24.94
TraesCS7D01G055900.1	Wheat	cytosol	40.37	24.83
CDY14655	Canola	cytosol	32.59	20.0
CDY14657	Canola	plastid	8.52	17.97

Protein Annotations

EnsemblPlants:CDY71004	EnsemblPlantsGene:GSBRNA2T00010549001	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF8	ProteinID:CDY71004
ProteinID:CDY71004.1	SEG:seg	UniParc:UPI0004EC1237	UniProt:A0A078JW59	MapMan:35.1	:

Description

BnaCnng70840DBnaCnng70840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JW59]

Coordinates

chrLK044110:+:1082..2330

Molecular Weight (calculated)

30495.3 Da

IEP (calculated)

4.671

GRAVY (calculated)

0.125

Length

270 amino acids

Sequence
(BLAST)

001: MDLSLNTKNV FSSALRFAMS IDTLKNSPEL AHELKTSAQE QVEFMLSEDE EVRLLVSREE VKSVVRLGIS SVLSALLDRL SSLLLLPEEF DVLNTLYDIE
101: WLCKVLPRME LMKDLVFKWA DVSNEILVIA QNCKLGVKVK LVEVTGKVLE AVGYGVVIVP CGSRACLLKL WLPFIRRLKA LVDAQGSESE YRMDEDLCEF
201: LEGSMVSLVL TLPSNDQAEV FGEWMRGIAL EGVKFPDLSE AFEVWCYRSK SAKRRLLEKC DRLASENLAH

Best Arabidopsis Sequence Match ( AT4G10800.1 )
(BLAST)

001: MQDDVIDVSL NTKNVFLSAL HFAMSIDTLK NSPELVDELK TSAQEQVEFM LSEDEEVRLL ISEEEVKSVV RLGISNVISM LLDRLSSLLV ILPECTEFSV
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH

Arabidopsis Description

BTB/POZ domain protein [Source:UniProtKB/TrEMBL;Acc:O81632]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.