Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g005670.2.1 | Tomato | cytosol | 94.52 | 95.5 |
| KRH62719 | Soybean | cytosol | 52.74 | 53.66 |
| KRH56238 | Soybean | cytosol | 52.4 | 52.94 |
| Bra035273.1-P | Field mustard | cytosol | 41.1 | 44.94 |
| CDX86843 | Canola | cytosol | 41.1 | 44.94 |
| CDY71004 | Canola | cytosol, peroxisome, plastid | 41.1 | 44.44 |
| AT4G10800.1 | Thale cress | cytosol | 42.12 | 43.46 |
| VIT_02s0025g02270.t01 | Wine grape | cytosol | 57.53 | 38.98 |
| EER89111 | Sorghum | cytosol | 46.92 | 31.71 |
| Os06t0129200-01 | Rice | cytosol | 45.89 | 30.95 |
| HORVU7Hr1G011170.1 | Barley | cytosol | 43.49 | 29.06 |
| HORVU7Hr1G011320.1 | Barley | cytosol | 43.49 | 29.06 |
| Zm00001d045494_P001 | Maize | cytosol | 42.81 | 28.8 |
| TraesCS7D01G055900.1 | Wheat | cytosol | 43.15 | 28.7 |
| TraesCS7A01G061100.1 | Wheat | cytosol | 42.81 | 28.54 |
| TraesCS4A01G428700.1 | Wheat | cytosol | 42.12 | 28.02 |
| PGSC0003DMT400055044 | Potato | mitochondrion | 36.64 | 22.29 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400081827 | EnsemblPlantsGene:PGSC0003DMG400032128 | EntrezGene:102595457 | InterPro:BTB/POZ_dom_prot | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF8 |
| PGSC:PGSC0003DMG400032128 | RefSeq:XP_006354131.1 | SEG:seg | UniParc:UPI0002947EEF | UniProt:M1D535 | MapMan:35.1 |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400032128]
Coordinates
chr1:+:1301798..1303592
Molecular Weight (calculated)
33335.1 Da
IEP (calculated)
4.253
GRAVY (calculated)
-0.124
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIFSDIQET ELSGTKEVFL SAIRYATSTG DSFPQFEDDL RASAQEQVEF MLEDDEKIPL VIADDEIKVE TRIVVSKIFS SFENELFSLI LEPDIANKDM
101: EKKIMRSLFD LEWMHNTLLK MDLMKDFVTH WSNISSNLLK VIEDKRFDSV MWDLKIKLIE VTSKVLEAVG YGTVVLPAES RVELLKTWLP YIRKMKSLSD
201: EMSKMDAALP YKMSDDLCQC VEGAIVSLVS ALPSNDQADI LADWISAEQV KYPDLSEAFE IWCYRTKSAQ RRLDEALTES AMPMPLPLSP ST
101: EKKIMRSLFD LEWMHNTLLK MDLMKDFVTH WSNISSNLLK VIEDKRFDSV MWDLKIKLIE VTSKVLEAVG YGTVVLPAES RVELLKTWLP YIRKMKSLSD
201: EMSKMDAALP YKMSDDLCQC VEGAIVSLVS ALPSNDQADI LADWISAEQV KYPDLSEAFE IWCYRTKSAQ RRLDEALTES AMPMPLPLSP ST
001: MQDDVIDVSL NTKNVFLSAL HFAMSIDTLK NSPELVDELK TSAQEQVEFM LSEDEEVRLL ISEEEVKSVV RLGISNVISM LLDRLSSLLV ILPECTEFSV
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH
Arabidopsis Description
BTB/POZ domain protein [Source:UniProtKB/TrEMBL;Acc:O81632]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.