Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86843 | Canola | cytosol | 98.13 | 98.13 |
| AT4G10800.1 | Thale cress | cytosol | 82.4 | 77.74 |
| KRH62719 | Soybean | cytosol | 47.57 | 44.25 |
| KRH56238 | Soybean | cytosol | 47.19 | 43.6 |
| Solyc01g005670.2.1 | Tomato | cytosol | 45.32 | 41.87 |
| PGSC0003DMT400081827 | Potato | cytosol | 44.94 | 41.1 |
| VIT_02s0025g02270.t01 | Wine grape | cytosol | 51.69 | 32.02 |
| Os06t0129200-01 | Rice | cytosol | 44.94 | 27.71 |
| EER89111 | Sorghum | cytosol | 43.82 | 27.08 |
| Zm00001d045494_P001 | Maize | cytosol | 43.07 | 26.5 |
| TraesCS7A01G061100.1 | Wheat | cytosol | 42.7 | 26.03 |
| TraesCS4A01G428700.1 | Wheat | cytosol | 42.7 | 25.97 |
| TraesCS7D01G055900.1 | Wheat | cytosol | 41.57 | 25.28 |
| HORVU7Hr1G011170.1 | Barley | cytosol | 41.2 | 25.17 |
| HORVU7Hr1G011320.1 | Barley | cytosol | 41.2 | 25.17 |
Protein Annotations
| EnsemblPlants:Bra035273.1 | EnsemblPlants:Bra035273.1-P | EnsemblPlantsGene:Bra035273 | InterPro:BTB/POZ_dom_prot | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF8 |
| SEG:seg | UniParc:UPI0002546CF1 | UniProt:M4F2H4 | MapMan:35.1 | : | : |
Description
AT4G10800 (E=2e-112) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: protein binding (TAIR:AT3G05675.2); Has 114 Blast hits to 114 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA08:-:9749733..9750536
Molecular Weight (calculated)
30014.7 Da
IEP (calculated)
4.604
GRAVY (calculated)
0.159
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSLSTKNV FSSALRFAMS IDTLKNSPEL AHELKTSAQE QVEFMLSEDD EVRLLVSREE VKSVVRLGIS SVLSTLLDRL SSLLLLPEEF DVLNDIEWLC
101: KVLPRMELMK DLVFKWADVS SEILVIAQNC KLGVKVKLVE VTGKVLEAVG YGVVIVPCGS RACLLKLWLP FIRRLKTLVD AEGSGSEYRM DEDLCEFLEG
201: SMVSLVLTLP SNDQAEVFGE WMRGIALEGV KFPDLSEAFE VWCYRSKSAK RRLLEKCDRL ASENLAL
101: KVLPRMELMK DLVFKWADVS SEILVIAQNC KLGVKVKLVE VTGKVLEAVG YGVVIVPCGS RACLLKLWLP FIRRLKTLVD AEGSGSEYRM DEDLCEFLEG
201: SMVSLVLTLP SNDQAEVFGE WMRGIALEGV KFPDLSEAFE VWCYRSKSAK RRLLEKCDRL ASENLAL
001: MQDDVIDVSL NTKNVFLSAL HFAMSIDTLK NSPELVDELK TSAQEQVEFM LSEDEEVRLL ISEEEVKSVV RLGISNVISM LLDRLSSLLV ILPECTEFSV
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH
Arabidopsis Description
BTB/POZ domain protein [Source:UniProtKB/TrEMBL;Acc:O81632]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.