CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045494_P001	Maize	cytosol	90.74	90.32
Os06t0129200-01	Rice	cytosol	75.23	75.06
HORVU7Hr1G011170.1	Barley	cytosol	66.44	65.68
HORVU7Hr1G011320.1	Barley	cytosol	66.44	65.68
TraesCS7A01G061100.1	Wheat	cytosol	65.97	65.07
TraesCS7D01G055900.1	Wheat	cytosol	64.58	63.55
TraesCS4A01G428700.1	Wheat	cytosol	64.58	63.55
VIT_02s0025g02270.t01	Wine grape	cytosol	50.69	50.81
KRH62719	Soybean	cytosol	31.71	47.74
Solyc01g005670.2.1	Tomato	cytosol	31.48	47.06
PGSC0003DMT400081827	Potato	cytosol	31.71	46.92
KRH56238	Soybean	cytosol	30.56	45.67
Bra035273.1-P	Field mustard	cytosol	27.08	43.82
CDY71004	Canola	cytosol, peroxisome, plastid	27.08	43.33
CDX86843	Canola	cytosol	26.39	42.7
AT4G10800.1	Thale cress	cytosol	27.78	42.4
EER99337	Sorghum	cytosol	37.5	32.21

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8069049	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	UniProt:C5Z386
EnsemblPlants:EER89111	ProteinID:EER89111	ProteinID:EER89111.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR31060	PANTHER:PTHR31060:SF8	InterPro:SKP1/BTB/POZ_sf
EnsemblPlantsGene:SORBI_3010G018700	SUPFAM:SSF54695	unigene:Sbi.19017	UniParc:UPI0001A89A4E	RefSeq:XP_002437744.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:1546217..1549037

Molecular Weight (calculated)

48054.0 Da

IEP (calculated)

4.335

GRAVY (calculated)

-0.117

Length

432 amino acids

Sequence
(BLAST)

001: MEPVKLVEGY NFDDHTTSDV RVCFKLIDEQ PEWFSCHSSV LSQNSKYFAD RLGQNDIRSN SCIEIECPRA EYDHYVKMLK LMYLPGESVV DSFDSVKSAL
101: GVLRASNSLG CELVTKGCIA YIEAASWDEN EEEEILEVAR SLGSDAVSLL ARLHAPSADA VKNVFISAIR FATCMETPFP PFLDDLKTSA QEQIDFMIHE
201: DDETALVTMD EDVRSVVQEG TTKLLSGLRT GLDLLATEFD QSPDLAEKGI LSSLADIDWV ANLLAKIEMM HAFVSGWSEI SDHILSVVHD KKYSSGLWAV
301: KAKLIEVTGK ALDAVGYGTV VLPASSRVHL LKTWLPYIQM TKPLLDENSK DETSLQMDSD MCQNIESAIV SMVLALPSDD QADILSEWMK NAEQFRYPDL
401: TEAFEVWCYR TKTAKRRLVG GLNGSSNPTV SL

Best Arabidopsis Sequence Match ( AT3G05675.2 )
(BLAST)

001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S

Arabidopsis Description

BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.