Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4A01G428700.1 | Wheat | cytosol | 94.53 | 94.53 |
TraesCS7A01G061100.1 | Wheat | cytosol | 94.08 | 94.29 |
HORVU7Hr1G011170.1 | Barley | cytosol | 88.15 | 88.56 |
HORVU7Hr1G011320.1 | Barley | cytosol | 88.15 | 88.56 |
Os06t0129200-01 | Rice | cytosol | 66.29 | 67.21 |
EER89111 | Sorghum | cytosol | 63.55 | 64.58 |
Zm00001d045494_P001 | Maize | cytosol | 61.05 | 61.75 |
VIT_02s0025g02270.t01 | Wine grape | cytosol | 46.24 | 47.1 |
KRH62719 | Soybean | cytosol | 28.93 | 44.25 |
Solyc01g005670.2.1 | Tomato | cytosol | 28.93 | 43.94 |
KRH56238 | Soybean | cytosol | 28.47 | 43.25 |
PGSC0003DMT400081827 | Potato | cytosol | 28.7 | 43.15 |
Bra035273.1-P | Field mustard | cytosol | 25.28 | 41.57 |
CDX86843 | Canola | cytosol | 24.6 | 40.45 |
CDY71004 | Canola | cytosol, peroxisome, plastid | 24.83 | 40.37 |
AT4G10800.1 | Thale cress | cytosol | 25.74 | 39.93 |
TraesCS5D01G369700.1 | Wheat | cytosol, mitochondrion, nucleus | 32.8 | 31.65 |
Protein Annotations
EnsemblPlants:TraesCS7D01G055900.1 | EnsemblPlantsGene:TraesCS7D01G055900 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:BTB/POZ_dom | InterPro:BTB/POZ_dom_prot | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF8 |
PFAM:PF00651 | PFscan:PS50097 | SEG:seg | SMART:SM00225 | SUPFAM:SSF54695 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7D:-:29834268..29835587
Molecular Weight (calculated)
48787.0 Da
IEP (calculated)
4.608
GRAVY (calculated)
-0.135
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: METVDAVDGY KFADESTSDV RVCFTRTGGR GEQPERFPCH SSVLSARSKY FADLLGQSDA RSGGSNNNCI QVQCPRAEYD HYVKLLKFMY LSRESIEDAI
101: TSVKSALGVL RAAISLKSEF VAETCIGYLE SASWDEKEEE EILQFAQTLA PEAAAPLLAR LQAPSANAVK TVFISAVRFA TSMETSAAPL FDDLKTAAQE
201: QIDFMLHDGD DPAIVMMDED VRSVLREGLT KLFSTLRTGL DLLASEFDKL PEQAEQRIVR SLVDIDWITT VLSKIELMNE FVSGWLEISD HVVSVVQDEK
301: YSSGLWTVKT KLIEVTGKAL DAVGYGSVIL PSTSRTHLVK TWLPYIRTTK RFLDAKAKDE AFPQMDAGLC QNIESAIVSL ILALPSGDQS DILLDWMQKA
401: DKFRYPDLTE AFEMWCYRSK TAIRRLNGAT DKGCNPISL
101: TSVKSALGVL RAAISLKSEF VAETCIGYLE SASWDEKEEE EILQFAQTLA PEAAAPLLAR LQAPSANAVK TVFISAVRFA TSMETSAAPL FDDLKTAAQE
201: QIDFMLHDGD DPAIVMMDED VRSVLREGLT KLFSTLRTGL DLLASEFDKL PEQAEQRIVR SLVDIDWITT VLSKIELMNE FVSGWLEISD HVVSVVQDEK
301: YSSGLWTVKT KLIEVTGKAL DAVGYGSVIL PSTSRTHLVK TWLPYIRTTK RFLDAKAKDE AFPQMDAGLC QNIESAIVSL ILALPSGDQS DILLDWMQKA
401: DKFRYPDLTE AFEMWCYRSK TAIRRLNGAT DKGCNPISL
001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
Arabidopsis Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.