Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71004 | Canola | cytosol, peroxisome, plastid | 79.51 | 83.33 |
| Bra035273.1-P | Field mustard | cytosol | 77.74 | 82.4 |
| CDX86843 | Canola | cytosol | 77.74 | 82.4 |
| KRH62719 | Soybean | cytosol | 47.35 | 46.69 |
| KRH56238 | Soybean | cytosol | 45.58 | 44.64 |
| Solyc01g005670.2.1 | Tomato | cytosol | 44.17 | 43.25 |
| PGSC0003DMT400081827 | Potato | cytosol | 43.46 | 42.12 |
| VIT_02s0025g02270.t01 | Wine grape | cytosol | 52.3 | 34.34 |
| Os06t0129200-01 | Rice | cytosol | 44.17 | 28.87 |
| EER89111 | Sorghum | cytosol | 42.4 | 27.78 |
| Zm00001d045494_P001 | Maize | cytosol | 41.34 | 26.96 |
| HORVU7Hr1G011170.1 | Barley | cytosol | 39.93 | 25.86 |
| HORVU7Hr1G011320.1 | Barley | cytosol | 39.93 | 25.86 |
| TraesCS7A01G061100.1 | Wheat | cytosol | 39.93 | 25.8 |
| TraesCS7D01G055900.1 | Wheat | cytosol | 39.93 | 25.74 |
| TraesCS4A01G428700.1 | Wheat | cytosol | 39.22 | 25.28 |
| AT3G05675.1 | Thale cress | cytosol | 32.16 | 20.63 |
Protein Annotations
| MapMan:35.1 | EntrezGene:826676 | ProteinID:AAC33942.1 | ProteinID:AEE82930.1 | ProteinID:ANM66959.1 | ArrayExpress:AT4G10800 |
| EnsemblPlantsGene:AT4G10800 | RefSeq:AT4G10800 | TAIR:AT4G10800 | RefSeq:AT4G10800-TAIR-G | EnsemblPlants:AT4G10800.1 | TAIR:AT4G10800.1 |
| EMBL:AY065352 | EMBL:AY117178 | InterPro:BTB/POZ_dom_prot | ProteinID:CAB40048.1 | ProteinID:CAB81181.1 | GO:GO:0008150 |
| RefSeq:NP_001328822.1 | RefSeq:NP_192818.1 | UniProt:O81632 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF8 | UniParc:UPI000009C996 |
| SEG:seg | : | : | : | : | : |
Description
BTB/POZ domain protein [Source:UniProtKB/TrEMBL;Acc:O81632]
Coordinates
chr4:+:6643273..6645530
Molecular Weight (calculated)
32231.5 Da
IEP (calculated)
4.465
GRAVY (calculated)
0.161
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDDVIDVSL NTKNVFLSAL HFAMSIDTLK NSPELVDELK TSAQEQVEFM LSEDEEVRLL ISEEEVKSVV RLGISNVISM LLDRLSSLLV ILPECTEFSV
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.