CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62719	Soybean	cytosol	91.7	92.33
Solyc01g005670.2.1	Tomato	cytosol	54.33	54.33
PGSC0003DMT400081827	Potato	cytosol	52.94	52.4
Bra035273.1-P	Field mustard	cytosol	43.6	47.19
CDX86843	Canola	cytosol	43.25	46.82
CDY71004	Canola	cytosol, peroxisome, plastid	43.6	46.67
VIT_02s0025g02270.t01	Wine grape	cytosol	68.86	46.17
AT4G10800.1	Thale cress	cytosol	44.64	45.58
Os06t0129200-01	Rice	cytosol	46.37	30.95
EER89111	Sorghum	cytosol	45.67	30.56
TraesCS7D01G055900.1	Wheat	cytosol	43.25	28.47
TraesCS7A01G061100.1	Wheat	cytosol	42.56	28.08
TraesCS4A01G428700.1	Wheat	cytosol	42.56	28.02
Zm00001d045494_P001	Maize	cytosol	41.52	27.65
HORVU7Hr1G011320.1	Barley	cytosol	41.18	27.23
HORVU7Hr1G011170.1	Barley	cytosol	41.18	27.23
KRH68010	Soybean	cytosol	38.75	25.45
KRG96258	Soybean	mitochondrion	39.1	24.51

Protein Annotations

EMBL:ACUP02004108	EnsemblPlants:KRH56238	EnsemblPlantsGene:GLYMA_06G312400	EntrezGene:100812225	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060
PANTHER:PTHR31060:SF8	ProteinID:KRH56238	ProteinID:KRH56238.1	ProteinID:KRH56239.1	SEG:seg	UniParc:UPI000233A8EB
UniProt:I1KFL2	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:50091159..50094858

Molecular Weight (calculated)

32495.6 Da

IEP (calculated)

4.654

GRAVY (calculated)

0.006

Length

289 amino acids

Sequence
(BLAST)

001: MAMSKIPKIK PGDVSTTKDI FVSAVRFAMS IERPCFPFGD ELRISAQEQI DYMLGEDGDT TIIMADDEVQ SIVRMGVYNI IHSFEMDLSS LLLDPTLELE
101: GVYDRIMKRV SDLEWMCNVL PKMDLMKNFV SNWAAISSKI LGIIEDKKLD HVMWGLKVKL IEVACKVLEA VAYGSVILPA PCRVQLLKTW FPYLRKMKPL
201: LDSKAVEETG FPYKMDEDLS QAIEGAIVSL ILTLPSNDQA DILADWIKNR EVGYPDLSEA FEVWCYRTKS AKRRLVEGLD GHGDGAASS

Best Arabidopsis Sequence Match ( AT4G10800.1 )
(BLAST)

001: MQDDVIDVSL NTKNVFLSAL HFAMSIDTLK NSPELVDELK TSAQEQVEFM LSEDEEVRLL ISEEEVKSVV RLGISNVISM LLDRLSSLLV ILPECTEFSV
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH

Arabidopsis Description

BTB/POZ domain protein [Source:UniProtKB/TrEMBL;Acc:O81632]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.