Factsheet for VIT_02s0025g02270.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56238	Soybean	cytosol	46.17	68.86
KRH62719	Soybean	cytosol	45.71	68.64
Solyc01g005670.2.1	Tomato	cytosol	39.68	59.17
PGSC0003DMT400081827	Potato	cytosol	38.98	57.53
CDY71004	Canola	cytosol, peroxisome, plastid	32.95	52.59
AT4G10800.1	Thale cress	cytosol	34.34	52.3
Os06t0129200-01	Rice	cytosol	52.2	51.96
Bra035273.1-P	Field mustard	cytosol	32.02	51.69
CDX86843	Canola	cytosol	32.02	51.69
EER89111	Sorghum	cytosol	50.81	50.69
Zm00001d045494_P001	Maize	cytosol	48.03	47.7
TraesCS7A01G061100.1	Wheat	cytosol	47.56	46.8
TraesCS4A01G428700.1	Wheat	cytosol	47.56	46.7
TraesCS7D01G055900.1	Wheat	cytosol	47.1	46.24
HORVU7Hr1G011320.1	Barley	cytosol	46.87	46.22
HORVU7Hr1G011170.1	Barley	cytosol	46.87	46.22
VIT_08s0105g00220.t01	Wine grape	cytosol	44.55	43.64

Protein Annotations

EntrezGene:100249644	wikigene:100249644	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot
ProteinID:CCB58282	ProteinID:CCB58282.1	UniProt:F6HU59	EMBL:FN596251	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	EntrezGene:LOC100249644	wikigene:LOC100249644	PFAM:PF00651	PFscan:PS50097
PANTHER:PTHR31060	PANTHER:PTHR31060:SF8	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI00015CD0A0	ArrayExpress:VIT_02s0025g02270
EnsemblPlantsGene:VIT_02s0025g02270	EnsemblPlants:VIT_02s0025g02270.t01	unigene:Vvi.14784	RefSeq:XP_002262601	RefSeq:XP_002262601.1	RefSeq:XP_003631407
RefSeq:XP_003631407.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:-:2020538..2023478

Molecular Weight (calculated)

48341.2 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.052

Length

431 amino acids

Sequence
(BLAST)

001: MDKAGAAKSC TLGDRSTSDI TVRLTNREGR PEWFYSHSSI LINKSKFFAD QLSHLDSTAC IEIHCSDFDY DHHVSLLRLL YLPEDSVVDS FDSVKTAIGI
101: LQVAVALHCE EITRSCIQYL EAIPWEDKEE EEILKAVSKL GPVAMPIVAR LQPVDLSTTR NVFVSAIRFA TSIAAPCLPF GDELKTSAQE QVEYMLGEDE
201: DTSLITADDE VKLVVKMGLS QICSSFEKEL SSLLLESDLT SEAVEDRVLR SLSDLEWMCN ILPKMDLMKE FVSNWTEISG RILTVVEDRK LDSLMWGLKV
301: KLIEVTGKVL EAVGYGNVIL PPPCRVQLLK TWLPYIRKMK PLLDSKGHED LGFPHKMDED LCESIEGAII SLILALPSND QADILADWMK TEQVRYPDLS
401: EAFEVWCYRT KSAKRRLVEG LDKVGNAAVS L

Best Arabidopsis Sequence Match ( AT3G05675.2 )
(BLAST)

001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S

Arabidopsis Description

BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.