CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56238	Soybean	cytosol	92.33	91.7
Solyc01g005670.2.1	Tomato	cytosol	55.05	54.67
PGSC0003DMT400081827	Potato	cytosol	53.66	52.74
Bra035273.1-P	Field mustard	cytosol	44.25	47.57
AT4G10800.1	Thale cress	cytosol	46.69	47.35
CDX86843	Canola	cytosol	43.9	47.19
CDY71004	Canola	cytosol, peroxisome, plastid	44.25	47.04
VIT_02s0025g02270.t01	Wine grape	cytosol	68.64	45.71
EER89111	Sorghum	cytosol	47.74	31.71
Os06t0129200-01	Rice	cytosol	47.39	31.41
TraesCS7D01G055900.1	Wheat	cytosol	44.25	28.93
TraesCS7A01G061100.1	Wheat	cytosol	43.55	28.54
TraesCS4A01G428700.1	Wheat	cytosol	43.55	28.47
Zm00001d045494_P001	Maize	cytosol	42.86	28.34
HORVU7Hr1G011320.1	Barley	cytosol	42.51	27.92
HORVU7Hr1G011170.1	Barley	cytosol	42.51	27.92
KRH68010	Soybean	cytosol	38.33	25.0
KRG96258	Soybean	mitochondrion	38.68	24.08

Protein Annotations

EMBL:ACUP02002346	EMBL:BT093667	EnsemblPlants:KRH62719	EnsemblPlantsGene:GLYMA_04G126600	EntrezGene:100815389	InterPro:BTB/POZ_dom_prot
PANTHER:PTHR31060	PANTHER:PTHR31060:SF8	ProteinID:KRH62719	ProteinID:KRH62719.1	SEG:seg	UniParc:UPI0001B15F04
UniProt:C6T873	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:17028434..17031499

Molecular Weight (calculated)

32169.1 Da

IEP (calculated)

4.479

GRAVY (calculated)

0.044

Length

287 amino acids

Sequence
(BLAST)

001: MSKIPNIKAG GVSTTKDIFV SAVRFAVSIE GPCFPFGDEL RISAQEQIDY MLGEDGDTTI IMSDDEVQSV VRMGFYNIIH SFEMDLSSLL LGTTLELEGV
101: YDRIMKRVSD LEWMCNVLPK MDLMKNFVSD WSAISSKILG IIEDKKLDHV MWGLKVKLIE VACKVLEAVG YGSVILPAPC RVQLLKTWFP YVRKMKPLLD
201: SKAVEETGFP YKMDEDLCQA IEGAIVSLIL TLPSNDQADI LADWIKSREV GYPDLSEAFE VWCYRTKSAK RRLVEDLDGQ SDAAVSP

Best Arabidopsis Sequence Match ( AT4G10800.1 )
(BLAST)

001: MQDDVIDVSL NTKNVFLSAL HFAMSIDTLK NSPELVDELK TSAQEQVEFM LSEDEEVRLL ISEEEVKSVV RLGISNVISM LLDRLSSLLV ILPECTEFSV
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH

Arabidopsis Description

BTB/POZ domain protein [Source:UniProtKB/TrEMBL;Acc:O81632]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.