Factsheet for Zm00001d045494_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89111	Sorghum	cytosol	90.32	90.74
Os06t0129200-01	Rice	cytosol	71.43	71.59
HORVU7Hr1G011170.1	Barley	cytosol	64.06	63.62
HORVU7Hr1G011320.1	Barley	cytosol	64.06	63.62
TraesCS7A01G061100.1	Wheat	cytosol	63.36	62.79
TraesCS4A01G428700.1	Wheat	cytosol	61.98	61.28
TraesCS7D01G055900.1	Wheat	cytosol	61.75	61.05
VIT_02s0025g02270.t01	Wine grape	cytosol	47.7	48.03
Solyc01g005670.2.1	Tomato	cytosol	28.8	43.25
Bra035273.1-P	Field mustard	cytosol	26.5	43.07
CDY71004	Canola	cytosol, peroxisome, plastid	26.73	42.96
KRH62719	Soybean	cytosol	28.34	42.86
PGSC0003DMT400081827	Potato	cytosol	28.8	42.81
CDX86843	Canola	cytosol	26.04	42.32
KRH56238	Soybean	cytosol	27.65	41.52
AT4G10800.1	Thale cress	cytosol	26.96	41.34
Zm00001d021387_P001	Maize	cytosol	36.41	36.24

Protein Annotations

EntrezGene:100191308	Gene3D:3.30.710.10	MapMan:35.1	ProteinID:AQL02405.1	UniProt:B4F8C5	EMBL:BT033363
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
EMBL:KJ727882	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR31060	PANTHER:PTHR31060:SF8	InterPro:SKP1/BTB/POZ_sf
SUPFAM:SSF54695	UniParc:UPI00017B639D	EnsemblPlantsGene:Zm00001d045494	EnsemblPlants:Zm00001d045494_P001	EnsemblPlants:Zm00001d045494_T001	SEG:seg

Description

TRAF transcription factor [Source:UniProtKB/TrEMBL;Acc:B4F8C5]

Coordinates

chr9:+:24432148..24433452

Molecular Weight (calculated)

48218.1 Da

IEP (calculated)

4.387

GRAVY (calculated)

-0.156

Length

434 amino acids

Sequence
(BLAST)

001: MEPVKLVEGY NFDDHTTSDV RVCFKLIDEQ PEWFSCHSSV LSQNSKYFSD RLGQNDIRSN SCVEIECPRA QYDHYVKMLK LMYLPGESIV DSFDSVKSAL
101: GVLRASNSLG CELVTKGCIA YIEAVPWDDN EEEEILEVAR SLGSDAVSLL ARLHAPSADA VKNVFISAIR FATCMETLFP PFLDDLKTSA QEQTDFMIHE
201: DDETALVMMD EDVRSVVQEG ITKLLSGLRT GLDLLATEFD QSPDQAEKGI LCSLADIDWV ANLSTKIEMT HAFVSGWSEM SGHILSVVQD SKYSSGLWAV
301: KAKLIEVTGK ALDAVGYGTV VLPAPSRFHL LKTWLPYIQT TKRSLDGNSK GEMSLQMDSD MWQNVESAIV SMVLALPSDD QADILSEWMK NAEQFRYPDL
401: TEAFEVWCYR SKTAKRRLVG GLNGSSSSNP TVSS

Best Arabidopsis Sequence Match ( AT3G05675.2 )
(BLAST)

001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S

Arabidopsis Description

BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.