Factsheet for TraesCS4A01G428700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G061100.1	Wheat	cytosol	94.99	95.21
TraesCS7D01G055900.1	Wheat	cytosol	94.53	94.53
HORVU7Hr1G011170.1	Barley	cytosol	88.38	88.79
HORVU7Hr1G011320.1	Barley	cytosol	88.38	88.79
Os06t0129200-01	Rice	cytosol	65.83	66.74
EER89111	Sorghum	cytosol	63.55	64.58
Zm00001d045494_P001	Maize	cytosol	61.28	61.98
VIT_02s0025g02270.t01	Wine grape	cytosol	46.7	47.56
KRH62719	Soybean	cytosol	28.47	43.55
Solyc01g005670.2.1	Tomato	cytosol	28.25	42.91
Bra035273.1-P	Field mustard	cytosol	25.97	42.7
KRH56238	Soybean	cytosol	28.02	42.56
PGSC0003DMT400081827	Potato	cytosol	28.02	42.12
CDX86843	Canola	cytosol	25.28	41.57
CDY71004	Canola	cytosol, peroxisome, plastid	25.51	41.48
AT4G10800.1	Thale cress	cytosol	25.28	39.22
TraesCS5A01G360300.1	Wheat	cytosol	32.8	31.03

Protein Annotations

EnsemblPlants:TraesCS4A01G428700.1	EnsemblPlantsGene:TraesCS4A01G428700	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil	PANTHER:PTHR31060
PANTHER:PTHR31060:SF8	PFAM:PF00651	PFscan:PS50097	SEG:seg	SMART:SM00225	SUPFAM:SSF54695
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:699884052..699885371

Molecular Weight (calculated)

48736.9 Da

IEP (calculated)

4.608

GRAVY (calculated)

-0.158

Length

439 amino acids

Sequence
(BLAST)

001: MEMVDAVDGY KFADESTSDV RVCFRRTGGR GEQPERFPCH SSVLSNRSKY FADLLGQQSD ARSGGSNNCI EVQCPRAEYD HYVKLLKFMY LSRDSIEDAI
101: TSVKSALGVL RAATSLKSEF VAETCIGYLE SASWEEKEEE EILQFAQTLA PEAAAPLLAR LQAPSANAVK TVFISAVRFA ASMETSAAPL FDDIKTAAQE
201: QIDFMLHDGD DPAIVMMDED VRSVLREGLT KLLSTLRTGL DLLASEFDKL PEQAEQRIVR SLVDIDWITT VLTKTELMNE FVSGWLEISD HVVSVVQNDK
301: YSSGLWAVKT KLIEVTGKAL DAVGYGSVIL PSTSRAHLVK TWLPYIRTTK RFLDAKAKDE AFPQMDAGLC QNIESAIVSL ILALPSGDQS DILSDWMQKA
401: DQFRYPDLTE AFEMWCYRSK TAIRRLNGAV DKGSNPISL

Best Arabidopsis Sequence Match ( AT4G10800.1 )
(BLAST)

001: MQDDVIDVSL NTKNVFLSAL HFAMSIDTLK NSPELVDELK TSAQEQVEFM LSEDEEVRLL ISEEEVKSVV RLGISNVISM LLDRLSSLLV ILPECTEFSV
101: LKTLYDIEWL CKVLPRMELM KDLVVKWTDA SSEILVIAQK CELDSRILGV KVKLVEVTGK ILEAVGYGIV IVPSKSRTCL LKIWLPFIRR LKTLVDAEGC
201: EYEYRMDEDL CEFIEGSMVS LVLTLPSNDQ AEVFGEWMRG IGLEGVKFPD LSEAFEVWCY RSKSAKRRLV ERCDRLAIVN LDH

Arabidopsis Description

BTB/POZ domain protein [Source:UniProtKB/TrEMBL;Acc:O81632]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.