Factsheet for TraesCS5A01G360300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G369700.1	Wheat	cytosol, mitochondrion, nucleus	92.46	94.29
TraesCS5B01G362800.1	Wheat	cytosol, mitochondrion, nucleus	92.03	92.03
HORVU5Hr1G088840.1	Barley	cytosol	71.77	72.39
Os07t0668800-01	Rice	cytosol	66.38	70.16
Zm00001d021387_P001	Maize	cytosol	63.79	67.89
EER99337	Sorghum	cytosol	65.3	60.24
Solyc01g007060.2.1	Tomato	cytosol	45.91	48.41
VIT_08s0105g00220.t01	Wine grape	cytosol	45.47	47.95
GSMUA_Achr1P23410_001	Banana	cytosol	35.56	46.61
PGSC0003DMT400055044	Potato	mitochondrion	45.91	44.38
KRH68010	Soybean	cytosol	42.03	44.32
KRG96258	Soybean	mitochondrion	41.59	41.87
AT3G05675.1	Thale cress	cytosol	39.44	41.5
CDY14655	Canola	cytosol	39.22	41.36
TraesCS7A01G061100.1	Wheat	cytosol	32.11	34.02
TraesCS4A01G428700.1	Wheat	cytosol	31.03	32.8
CDY14657	Canola	plastid	5.39	19.53

Protein Annotations

EnsemblPlants:TraesCS5A01G360300.1	EnsemblPlantsGene:TraesCS5A01G360300	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060	PANTHER:PTHR31060:SF7
PFscan:PS50097	SEG:seg	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5A:+:561973231..561975000

Molecular Weight (calculated)

49605.0 Da

IEP (calculated)

4.901

GRAVY (calculated)

-0.108

Length

464 amino acids

Sequence
(BLAST)

001: MRAAARPKIG DRATSDVVVR LRTPDSGRDE WLYCHSRVLA AGSAYFADRL SDAWPTCQIL DSRYCVEVHC RDADLSSHVT ALRLLYAAEP VSRFGVRGAL
101: SLLDAAAHLA CARTAAACAD YLESAPWDEA DEEEILAAAP RLGAHRARVL ARLRPADPAP ATAIFLSAFR HATAAPSAAS RELKPAAQEQ LEYMLTEDDD
201: APLLAFGAGS SDAVKSQVKG CVTGLLNSFS NFTSSALTKQ REPPCSGELQ QDLHSFVSDI AWVCQVLGKL EMMKFLAAYW VEASSAVVAA VEAAAAECHP
301: GPECLKTRLK VVEISAKVLE AVAFGNVVLP AEKRRHAVSV WIGFAGTTRH LVDEADRGND DGDGDDEDGN NGDGDTEAEA ASASAAAAAA KIGLDGEVWQ
401: GLESAITSIV TTLPSNTQAE VLSEWLQSKH AAFPDLSEAF DAWCYRSKVA RRRLSFLNST NRAS

Best Arabidopsis Sequence Match ( AT3G05675.2 )
(BLAST)

001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S

Arabidopsis Description

BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.