Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G369700.1 | Wheat | cytosol, mitochondrion, nucleus | 93.97 | 95.82 |
| TraesCS5A01G360300.1 | Wheat | cytosol | 92.03 | 92.03 |
| HORVU5Hr1G088840.1 | Barley | cytosol | 74.78 | 75.43 |
| Os07t0668800-01 | Rice | cytosol | 66.38 | 70.16 |
| Zm00001d021387_P001 | Maize | cytosol | 64.22 | 68.35 |
| EER99337 | Sorghum | cytosol | 65.52 | 60.44 |
| Solyc01g007060.2.1 | Tomato | cytosol | 46.55 | 49.09 |
| VIT_08s0105g00220.t01 | Wine grape | cytosol | 46.12 | 48.64 |
| GSMUA_Achr1P23410_001 | Banana | cytosol | 36.42 | 47.74 |
| KRH68010 | Soybean | cytosol | 43.75 | 46.14 |
| PGSC0003DMT400055044 | Potato | mitochondrion | 46.12 | 44.58 |
| KRG96258 | Soybean | mitochondrion | 43.1 | 43.38 |
| AT3G05675.1 | Thale cress | cytosol | 39.22 | 41.27 |
| CDY14655 | Canola | cytosol | 38.79 | 40.91 |
| CDY14657 | Canola | plastid | 5.17 | 18.75 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G362800.1 | EnsemblPlantsGene:TraesCS5B01G362800 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom_prot | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR31060 |
| PANTHER:PTHR31060:SF7 | SEG:seg | SUPFAM:SSF54695 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5B:+:541947285..541948952
Molecular Weight (calculated)
49166.5 Da
IEP (calculated)
4.731
GRAVY (calculated)
-0.052
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAAARPKIG DRATSDVVVR LRTPDSGRDE WLYCHSGVLA AGSAYFADRL SDAWPTCQIL DSRYCVEVHC RDADLSSHVT ALRLLYAADP VSRFGVRGAL
101: ALLEAAAHLG CARTAADCAD YLESAPWDEA DEEEILAAAP RLGAHRARVL ARLRPADPGP ATAIFLSAFR HATAAPSAAS RELKSAAQEQ LEYMLTEDDD
201: APLLTFDAGS SDAVKSQVKG CVTGLLNRFS DFTGSALTKQ TEAPCSGELQ QALHSFVSDI AWVCQVLGKL EMMKCLAAYW VEASSAVVAA VEAAAAAECH
301: PGPECLKTRL KVVEISAKVL EAVAFGNVVL PAEKRRHAVS VWIAFAGTTR HLVDEADRGS NDDGDDDGGN NGDGGTEAEA ASASAAAAAA KVGLDGEVWQ
401: GLESAITSIV TTLPSNAQAE VLSEWLQSEH AAFPDLSEAF DAWCYRSKVA RRRLSFLNSA NAAS
101: ALLEAAAHLG CARTAADCAD YLESAPWDEA DEEEILAAAP RLGAHRARVL ARLRPADPGP ATAIFLSAFR HATAAPSAAS RELKSAAQEQ LEYMLTEDDD
201: APLLTFDAGS SDAVKSQVKG CVTGLLNRFS DFTGSALTKQ TEAPCSGELQ QALHSFVSDI AWVCQVLGKL EMMKCLAAYW VEASSAVVAA VEAAAAAECH
301: PGPECLKTRL KVVEISAKVL EAVAFGNVVL PAEKRRHAVS VWIAFAGTTR HLVDEADRGS NDDGDDDGGN NGDGGTEAEA ASASAAAAAA KVGLDGEVWQ
401: GLESAITSIV TTLPSNAQAE VLSEWLQSEH AAFPDLSEAF DAWCYRSKVA RRRLSFLNSA NAAS
001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
Arabidopsis Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.