Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G369700.1 | Wheat | cytosol, mitochondrion, nucleus | 74.13 | 74.95 |
| TraesCS5B01G362800.1 | Wheat | cytosol, mitochondrion, nucleus | 75.43 | 74.78 |
| TraesCS5A01G360300.1 | Wheat | cytosol | 72.39 | 71.77 |
| Os07t0668800-01 | Rice | cytosol | 56.96 | 59.68 |
| Zm00001d021387_P001 | Maize | cytosol | 55.0 | 58.03 |
| EER99337 | Sorghum | cytosol | 55.65 | 50.89 |
| Solyc01g007060.2.1 | Tomato | cytosol | 39.35 | 41.14 |
| VIT_08s0105g00220.t01 | Wine grape | cytosol | 37.61 | 39.32 |
| PGSC0003DMT400055044 | Potato | mitochondrion | 39.57 | 37.92 |
| KRH68010 | Soybean | cytosol | 35.87 | 37.5 |
| GSMUA_Achr1P23410_001 | Banana | cytosol | 28.7 | 37.29 |
| AT3G05675.1 | Thale cress | cytosol | 34.78 | 36.28 |
| CDY14655 | Canola | cytosol | 34.13 | 35.68 |
| KRG96258 | Soybean | mitochondrion | 35.43 | 35.36 |
| HORVU7Hr1G011320.1 | Barley | cytosol | 26.09 | 27.46 |
| HORVU7Hr1G011170.1 | Barley | cytosol | 26.09 | 27.46 |
| CDY14657 | Canola | plastid | 2.17 | 7.81 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G088840.1 | EnsemblPlantsGene:HORVU5Hr1G088840 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom_prot | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR31060 |
| PANTHER:PTHR31060:SF7 | SEG:seg | SUPFAM:SSF54695 | UniParc:UPI000B482D42 | UniProt:A0A287S6Z3 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr5H:+:582645188..582646900
Molecular Weight (calculated)
48692.7 Da
IEP (calculated)
7.185
GRAVY (calculated)
-0.174
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: VSGHVSVSEK LPHPGPGGTM RAAGRPKIGD RATSDVVVRL RTPDSGRDEW LYCHSGVLAA GSGYFADRLS DAWPTCQILD SRYCVEVHCR DADLSSHVTA
101: LRLLYAAEPV SRFGVRGALG LLEAAAHLAC ARTAAACADY LESAPWDEAD EEEILAAAPR LGAHRDRVLA RLRPADPGPA TAIFLSAFRH ATAAADRSRE
201: LKSAAQEQLE YMLTEDDDAP LLTFDAVKSQ VKGCVTGLLN RFSDFTSSAL TKQTEAPCSG PGELQXXXXQ QELHSFVSDI AWVCQVLGKL EMMKCLAAYW
301: VEASSAVVAA VEAAAAECHP GPECLKTRLK VVEISAKVLE AVAFGNVVLP AEKRRHAVNI WIRFAGTTRH LVDEADRGSR SSGGGGRKDR PGRRGLAGAG
401: VGHHLDRDDA AVEHPGRGTV GVASVGARRV PGPVGGVRRL VLPVQGRAEE AVFPQQRQWT
101: LRLLYAAEPV SRFGVRGALG LLEAAAHLAC ARTAAACADY LESAPWDEAD EEEILAAAPR LGAHRDRVLA RLRPADPGPA TAIFLSAFRH ATAAADRSRE
201: LKSAAQEQLE YMLTEDDDAP LLTFDAVKSQ VKGCVTGLLN RFSDFTSSAL TKQTEAPCSG PGELQXXXXQ QELHSFVSDI AWVCQVLGKL EMMKCLAAYW
301: VEASSAVVAA VEAAAAECHP GPECLKTRLK VVEISAKVLE AVAFGNVVLP AEKRRHAVNI WIRFAGTTRH LVDEADRGSR SSGGGGRKDR PGRRGLAGAG
401: VGHHLDRDDA AVEHPGRGTV GVASVGARRV PGPVGGVRRL VLPVQGRAEE AVFPQQRQWT
001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
Arabidopsis Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.