Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055044 | Potato | mitochondrion | 94.32 | 86.46 |
| VIT_08s0105g00220.t01 | Wine grape | cytosol | 65.45 | 65.45 |
| KRH68010 | Soybean | cytosol | 62.5 | 62.5 |
| KRG96258 | Soybean | mitochondrion | 61.36 | 58.57 |
| AT3G05675.1 | Thale cress | cytosol | 55.68 | 55.56 |
| CDY14655 | Canola | cytosol | 53.64 | 53.64 |
| Os07t0668800-01 | Rice | cytosol | 52.05 | 52.16 |
| GSMUA_Achr1P23410_001 | Banana | cytosol | 41.82 | 51.98 |
| Zm00001d021387_P001 | Maize | cytosol | 50.0 | 50.46 |
| TraesCS5D01G369700.1 | Wheat | cytosol, mitochondrion, nucleus | 48.18 | 46.59 |
| TraesCS5B01G362800.1 | Wheat | cytosol, mitochondrion, nucleus | 49.09 | 46.55 |
| TraesCS5A01G360300.1 | Wheat | cytosol | 48.41 | 45.91 |
| EER99337 | Sorghum | cytosol | 50.68 | 44.33 |
| HORVU5Hr1G088840.1 | Barley | cytosol | 41.14 | 39.35 |
| Solyc01g005670.2.1 | Tomato | cytosol | 24.32 | 37.02 |
| CDY14657 | Canola | plastid | 7.5 | 25.78 |
Protein Annotations
| EnsemblPlants:Solyc01g007060.2.1 | EnsemblPlantsGene:Solyc01g007060.2 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom_prot | InterPro:SKP1/BTB/POZ_sf | ncoils:Coil |
| PANTHER:PTHR31060 | PANTHER:PTHR31060:SF7 | SEG:seg | SUPFAM:SSF54695 | UniParc:UPI00027626EE | UniProt:K4ASS2 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:1598738..1601058
Molecular Weight (calculated)
50004.4 Da
IEP (calculated)
4.463
GRAVY (calculated)
-0.039
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: METVPNELKT SSKIGDRPTS DVVVRLRTQD GRDDWLYCHS HILIEESKYF ADRLSDSWPT CQFLDSRNCV EVYCEEPDLD SHVNVLRLFY VIADSLMMEI
101: CHGVKNALGI LRIAVKLGCP RITAVCVDYL EAVPWEEAEE EEILNTIPSM GSKVEPVLAR LQPVNPTAVM KIFLAALQFA TSSPPSPLND LKNTAQEQLE
201: YMLTEDDDAP LLTADEEIKL EVMRCVKKLL DRFNSIVESL LCDLQESISD AGRMQSLHSC LTDLLWACQI LGKLEIIRDF VCSWTELSVK LVTIVQQKDE
301: ENQILKTKLK VLEVTAKVLE AIGYGIVVLP TVKRLHMVKL WLPFVRTMKP LVDSVTEETE DEITLKVDSE IWQSLESAFV AIILTLPSVD QTDILTEWLE
401: NQQIRYPDLT EAFEVWCYRS KVAKRRLATL GEEHNTAKAV
101: CHGVKNALGI LRIAVKLGCP RITAVCVDYL EAVPWEEAEE EEILNTIPSM GSKVEPVLAR LQPVNPTAVM KIFLAALQFA TSSPPSPLND LKNTAQEQLE
201: YMLTEDDDAP LLTADEEIKL EVMRCVKKLL DRFNSIVESL LCDLQESISD AGRMQSLHSC LTDLLWACQI LGKLEIIRDF VCSWTELSVK LVTIVQQKDE
301: ENQILKTKLK VLEVTAKVLE AIGYGIVVLP TVKRLHMVKL WLPFVRTMKP LVDSVTEETE DEITLKVDSE IWQSLESAFV AIILTLPSVD QTDILTEWLE
401: NQQIRYPDLT EAFEVWCYRS KVAKRRLATL GEEHNTAKAV
001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S
Arabidopsis Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.