Factsheet for VIT_08s0105g00220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68010	Soybean	cytosol	72.73	72.73
KRG96258	Soybean	mitochondrion	71.59	68.33
Solyc01g007060.2.1	Tomato	cytosol	65.45	65.45
PGSC0003DMT400055044	Potato	mitochondrion	65.68	60.21
AT3G05675.1	Thale cress	cytosol	57.95	57.82
CDY14655	Canola	cytosol	55.0	55.0
GSMUA_Achr1P23410_001	Banana	cytosol	43.41	53.95
Zm00001d021387_P001	Maize	cytosol	51.14	51.61
Os07t0668800-01	Rice	cytosol	50.91	51.03
TraesCS5D01G369700.1	Wheat	cytosol, mitochondrion, nucleus	47.73	46.15
TraesCS5B01G362800.1	Wheat	cytosol, mitochondrion, nucleus	48.64	46.12
TraesCS5A01G360300.1	Wheat	cytosol	47.95	45.47
VIT_02s0025g02270.t01	Wine grape	cytosol	43.64	44.55
EER99337	Sorghum	cytosol	50.68	44.33
HORVU5Hr1G088840.1	Barley	cytosol	39.32	37.61
CDY14657	Canola	plastid	7.73	26.56

Protein Annotations

EntrezGene:100260908	wikigene:100260908	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom_prot	ProteinID:CCB47913
ProteinID:CCB47913.1	UniProt:F6H6S7	EMBL:FN595245	EntrezGene:LOC100260908	wikigene:LOC100260908	PANTHER:PTHR31060
PANTHER:PTHR31060:SF7	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI00021089FF	ArrayExpress:VIT_08s0105g00220	EnsemblPlantsGene:VIT_08s0105g00220
EnsemblPlants:VIT_08s0105g00220.t01	unigene:Vvi.22105	RefSeq:XP_002264844	RefSeq:XP_002264844.2	RefSeq:XP_019077197.1	SEG:seg

Description

No Description!

Coordinates

chr8:+:7214601..7218487

Molecular Weight (calculated)

49648.7 Da

IEP (calculated)

4.426

GRAVY (calculated)

0.002

Length

440 amino acids

Sequence
(BLAST)

001: MEPPSNETRA PSRIGDRPTS DVVVRLRTQE GRDDWLYCHS HVLVEKSKYF ADRLSENWPT CQILDSRNCV EVYCQESDFD YHVNVLRLLY VVMDGSVDDM
101: WHGVRNALSC LRVAVELGCQ QIITACVNYL EAVPWEEAEE DEILRTIPGM GSQVEPILAR LQPVNSTAIV GIFLSAIRFA TSSPPPHMND LKSSAQEQLE
201: YMLTEDDDAP LLMADDEIKF EVRECVMGLL ARFNNLLETF FCESGESVTM AGEMLLFQSY LSDMSWACQI LGKLEIMREF VSTWTDASEK IVKAIELASS
301: KADVLEMKLK VIEVASKVLE AIGYGTVIFP ATKRLHMVMV WLPFVRVTKR LIDSIPTNGD DALTFKLDGE LWQSLESAFV SIIVALPSGD QAEILTEWLG
401: NEHIRYPDLT EAFEVWCYRS KVAKRRLALL GAIHGVTDAL

Best Arabidopsis Sequence Match ( AT3G05675.2 )
(BLAST)

001: MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN
101: LCHNVKSALG ILSVAKELSC PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF ATSSPPLLLG DIKSSAQEQI
201: EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
301: TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE
401: WLSKNGLYPD LTEAFEVWCY RSKVAKRRLG LVGGEEENGM S

Arabidopsis Description

BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMR2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.