Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P29370_001 | Banana | cytosol | 19.61 | 40.4 |
| GSMUA_Achr7P06430_001 | Banana | plastid | 24.02 | 33.79 |
| GSMUA_Achr9P10840_001 | Banana | cytosol | 22.55 | 32.39 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.16 | 28.69 |
| GSMUA_Achr8P15120_001 | Banana | cytosol | 18.63 | 28.57 |
| GSMUA_Achr1P05130_001 | Banana | cytosol | 25.49 | 26.4 |
| GSMUA_Achr9P10720_001 | Banana | cytosol | 20.59 | 24.14 |
| GSMUA_Achr8P20690_001 | Banana | plastid | 22.55 | 23.96 |
| GSMUA_Achr8P15130_001 | Banana | cytosol, extracellular, vacuole | 22.06 | 23.32 |
| GSMUA_Achr9P10790_001 | Banana | cytosol | 23.04 | 22.93 |
| GSMUA_Achr9P10830_001 | Banana | cytosol | 25.0 | 20.9 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.51 | 17.48 |
| GSMUA_AchrUn_... | Banana | extracellular, plastid, vacuole | 22.06 | 16.42 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 4.9 | 6.71 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P20760_001 | EnsemblPlants:GSMUA_Achr3T20760_001 | EnsemblPlantsGene:GSMUA_Achr3G20760_001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| PANTHER:PTHR45172 | PFAM:PF01419 | PFscan:PS51752 | SignalP:SignalP-noTM | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI0002963A99 | UniProt:M0SGE2 | MapMan:35.1 | : | : | : |
Description
Putative Agglutinin [Source:GMGC_GENE;Acc:GSMUA_Achr3G20760_001]
Coordinates
chr3:+:21881478..21882374
Molecular Weight (calculated)
22593.9 Da
IEP (calculated)
7.565
GRAVY (calculated)
-0.045
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLFLFLDLM HTGNSSLSAE GLKMSIIQDD QFAIMLGVTG RVSHRSSSWD EVCYGKIKQI LITHGDAINS IQVAYDFKGT PILAHRHGGD GDRFDCINLL
101: SWETLTVVKG YYGPLGNDGI DVVLSLTFVT NGGNTYGPFG RESGTPFCFN IRNGVHFWGF HGYSNSRYLC NIGIYVKPTA EYKYHFSPKP EKFVAARSVC
201: NVSS
101: SWETLTVVKG YYGPLGNDGI DVVLSLTFVT NGGNTYGPFG RESGTPFCFN IRNGVHFWGF HGYSNSRYLC NIGIYVKPTA EYKYHFSPKP EKFVAARSVC
201: NVSS
001: MAAATMSWDD GKHMKVKRVQ ITYEDVINSI EAEYDGDTHN PHHHGTPGKK SDGVSLSPDE YITDVTGYYK TTGAEDAIAA LAFKTNKTEY GPYGNKTRNQ
101: FSIHAPKDNQ IAGFQGISSN VLNSIDVHFA PLPSSSSSSS SLSQANKVDA QGGKGGTSWD DGAHDHVRRV YIGQGDSGVT YVKFEYEKDD KKESREHGKK
201: TLLGAEVFEV DPDDYITSVE VQSDRIFGQD TEVITSLIFK TSKGKFSPPF GLEGSQKYEL KDKNGGKLVG FHGRVGGELL NALGAYFAPS SGRGTPSATQ
301: PPGSAQPTGS AGAKKLEAKG GNVGNPWDDG PHEGVRKVYI GQGDSGVSYV KFVYDKDSKE VPGNDHGKRT LLAPEEFLLE YPNEYITSVE LNYDKIFGTE
401: GEIITMLRFT TNKRTSPPFG LEGAKSVLLK EDGHKIVGFH GKAGADIIHQ VGVHVKPISK
101: FSIHAPKDNQ IAGFQGISSN VLNSIDVHFA PLPSSSSSSS SLSQANKVDA QGGKGGTSWD DGAHDHVRRV YIGQGDSGVT YVKFEYEKDD KKESREHGKK
201: TLLGAEVFEV DPDDYITSVE VQSDRIFGQD TEVITSLIFK TSKGKFSPPF GLEGSQKYEL KDKNGGKLVG FHGRVGGELL NALGAYFAPS SGRGTPSATQ
301: PPGSAQPTGS AGAKKLEAKG GNVGNPWDDG PHEGVRKVYI GQGDSGVSYV KFVYDKDSKE VPGNDHGKRT LLAPEEFLLE YPNEYITSVE LNYDKIFGTE
401: GEIITMLRFT TNKRTSPPFG LEGAKSVLLK EDGHKIVGFH GKAGADIIHQ VGVHVKPISK
Arabidopsis Description
JAL36Jacalin-related lectin 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIF8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.