Factsheet for GSMUA_AchrUn_randomP17670_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

plastid 4
extracellular 3
vacuole 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15130_001	Banana	cytosol, extracellular, vacuole	63.87	90.67
GSMUA_Achr8P20690_001	Banana	plastid	56.57	80.73
GSMUA_Achr8P15120_001	Banana	cytosol	39.05	80.45
GSMUA_AchrUn_...	Banana	cytosol	33.94	76.23
GSMUA_Achr9P10840_001	Banana	cytosol	32.48	62.68
GSMUA_Achr9P10720_001	Banana	cytosol	36.13	56.9
GSMUA_AchrUn_...	Banana	cytosol	56.57	54.2
GSMUA_Achr9P10790_001	Banana	cytosol	35.4	47.32
GSMUA_Achr9P10830_001	Banana	cytosol	37.59	42.21
GSMUA_Achr4P29370_001	Banana	cytosol	12.41	34.34
GSMUA_Achr1P05130_001	Banana	cytosol	20.07	27.92
GSMUA_Achr3P20760_001	Banana	extracellular	16.42	22.06
GSMUA_Achr7P06430_001	Banana	plastid	10.58	20.0
PGSC0003DMT400044313	Potato	cytosol	18.61	16.83
PGSC0003DMT400009575	Potato	cytosol	18.98	15.85
Solyc04g080420.2.1	Tomato	cytosol, nucleus	19.34	15.59
Solyc04g080410.1.1	Tomato	cytosol	14.6	12.95
PGSC0003DMT400009447	Potato	cytosol, mitochondrion, plastid	10.95	11.36
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	3.65	6.71

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0030246	EnsemblPlantsGene:GSMUA_AchrUn_randomG17670_001	EnsemblPlants:GSMUA_AchrUn_randomP17670_001	EnsemblPlants:GSMUA_AchrUn_randomT17670_001	InterPro:IPR001229
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	UniProt:M0UA26	PFAM:PF01419
PFscan:PS51752	PANTHER:PTHR45172	SMART:SM00915	SUPFAM:SSF51101	TMHMM:TMhelix	UniParc:UPI000295AA24
SEG:seg	:	:	:	:	:

Description

Putative Mannose/glucose-specific lectin (Fragment) [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17670_001]

Coordinates

chrchrUn_random:-:83892096..83893096

Molecular Weight (calculated)

29800.1 Da

IEP (calculated)

8.674

GRAVY (calculated)

0.080

Length

274 amino acids

Sequence
(BLAST)

001: MDLFFTFINN LTCRIPSSQC LMDLSLIKCR YMFCGPKLSL IIIIFFYSLP PISITRSIYI SRPRVSRLRM YMFNVLFEEH GYGPTHSILS GHVFPGGVGE
101: EVAINTPHPF PEEGRASSSS SSSCAHTHPY LQMAGEIKVG AWGGNGGSAW DMGAAYRITN IKIRAGDNID AIVITFTRYG LTETKHFGGS GGTPYEIPLQ
201: EDEYLVGVEG SVDTLGTITL VRNLTLRTNK KSYGPFGTSG GKPFSVPVAS GKIIGFFGRA GTMIDAIGVY LAPK

Best Arabidopsis Sequence Match ( AT3G16410.1 )
(BLAST)

001: MAQKVEAQGG NGGNQWDDGS EYDAVTKIQV AAGGNGIEYV KFTYVKNGQT EEAPLRGVKG RSFEADPFVI NHPEEHLVSV EGRYNPEGLI LGLTFKSNKK
101: TSDLIGYEDG TPFTLQVQDK KIVGFYGFAG NNLHSLGAYF APLTNVTPLN AKKLEAKGGD TGDIWDDGVY DNVRKVYVGQ AQYGIAFVKF EYVNGSQVVV
201: GDEHGKKTEL GVEEFEIDAD DYIVYVEGYR EKVNGMTSEM ITFLSFKTYK GKTSQPIEQR PGIKFVLQGG KIVGFHGRST DVLDSLGAYI SLSPTPNLHG
301: KWTKVDENGD GPGLRCSHDI AQVGNKIYSF GGEFTPNQPI DKHLYVFDIE SRTWSISPAT GDIPTLSCLG VCMVSIGSTL YVFGGRDASR QYNGFYSFDT
401: TTNEWKLLTP VEEGPTPRSF HSMAADEENV YVFGGVSATA RLNTLDSYNI VDKKWFHCST PGDSLTARGG AGLEVVQGKV WVVYGFNGCE VDDVHYYDPV
501: QDKWTQVETF GVRPSERSVF ASAALGKHIV IFGGEIAMDP LAHVGPGQLT DGTFALDTET LQWERLDKFG GEEETPSSRG WTASTTATIG GKKGLVMHGG
601: KAPTNDRFDD LFFYGIDSA

Arabidopsis Description

NSP4Nitrile-specifier protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O04316]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.