Factsheet for GSMUA_Achr4P29370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G105700.1	Wheat	cytosol	53.54	38.13
TraesCS6B01G135000.1	Wheat	cytosol	55.56	37.67
TraesCS3B01G032600.1	Wheat	cytosol	55.56	37.16
TraesCS7D01G254500.1	Wheat	cytosol	56.57	36.13
TraesCS7A01G256100.1	Wheat	cytosol	56.57	36.13
TraesCS7B01G152700.1	Wheat	cytosol	55.56	35.48
HORVU7Hr1G052850.1	Barley	cytosol	55.56	35.48
TraesCS3D01G028700.1	Wheat	cytosol	48.48	34.04
HORVU7Hr1G109850.2	Barley	cytosol	54.55	33.75
TraesCS3B01G052500.1	Wheat	cytosol	47.47	33.33
TraesCS3D01G030000.1	Wheat	cytosol	54.55	32.53
GSMUA_Achr7P06430_001	Banana	plastid	40.4	27.59
TraesCS3A01G131600.1	Wheat	cytosol	48.48	25.95
GSMUA_AchrUn_...	Banana	cytosol	29.29	23.77
GSMUA_Achr9P10840_001	Banana	cytosol	33.33	23.24
TraesCS3B01G031800.1	Wheat	cytosol, plastid	53.54	21.9
GSMUA_Achr1P05130_001	Banana	cytosol	43.43	21.83
TraesCS3D01G029200.1	Wheat	cytosol	48.48	20.43
GSMUA_Achr8P15120_001	Banana	cytosol	27.27	20.3
GSMUA_Achr9P10720_001	Banana	cytosol	35.35	20.11
GSMUA_Achr3P20760_001	Banana	extracellular	40.4	19.61
GSMUA_Achr8P20690_001	Banana	plastid	34.34	17.71
GSMUA_Achr8P15130_001	Banana	cytosol, extracellular, vacuole	34.34	17.62
TraesCS3B01G053100.1	Wheat	cytosol, plastid	33.33	16.92
TraesCS3B01G165200.1	Wheat	cytosol	48.48	16.55
TraesCS1D01G367900.1	Wheat	cytosol	52.53	16.25
GSMUA_Achr9P10790_001	Banana	cytosol	33.33	16.1
GSMUA_Achr9P10830_001	Banana	cytosol	33.33	13.52
GSMUA_AchrUn_...	Banana	extracellular, plastid, vacuole	34.34	12.41
GSMUA_AchrUn_...	Banana	cytosol	34.34	11.89
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	9.09	6.04

Protein Annotations

EnsemblPlants:GSMUA_Achr4P29370_001	EnsemblPlants:GSMUA_Achr4T29370_001	EnsemblPlantsGene:GSMUA_Achr4G29370_001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR45172	PFAM:PF01419	PFscan:PS51752	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI000294EEF3
UniProt:M0ST49	MapMan:35.2	:	:	:	:

Description

Putative Mannose/glucose-specific lectin (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr4G29370_001]

Coordinates

chr4:+:27360302..27361045

Molecular Weight (calculated)

10903.7 Da

IEP (calculated)

5.831

GRAVY (calculated)

-0.391

Length

99 amino acids

Sequence
(BLAST)

1: MYRRNGGDVW TDQWGGGGGQ MSEFNLDDDE TLRSIRGHYG RFDGVSILRS LTFVSNKRTY GPFGREEGVA FTLEAPGSRI VGFTGRSGLY LDALGIYVA

Best Arabidopsis Sequence Match ( AT1G19715.2 )
(BLAST)

001: MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT ICVRSLTFES NRRKYGPFGV DSGTFFALPK
101: SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE
201: KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI
301: KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH NNSGTAQIEN SPWANKLVLA ANGHGEEVDR
401: GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT HRIKFEYPDE SITCISGYYG PLNNSDRYNV
501: VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL F

Arabidopsis Description

JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.