Factsheet for GSMUA_Achr8P15130_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole, cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15120_001	Banana	cytosol	54.4	78.95
GSMUA_AchrUn_...	Banana	cytosol	48.7	77.05
GSMUA_Achr8P20690_001	Banana	plastid	69.95	70.31
GSMUA_AchrUn_...	Banana	extracellular, plastid, vacuole	90.67	63.87
GSMUA_Achr9P10840_001	Banana	cytosol	45.08	61.27
GSMUA_AchrUn_...	Banana	cytosol	84.46	56.99
GSMUA_Achr9P10720_001	Banana	cytosol	49.74	55.17
GSMUA_Achr9P10790_001	Banana	cytosol	46.11	43.41
GSMUA_Achr9P10830_001	Banana	cytosol	50.78	40.16
GSMUA_Achr4P29370_001	Banana	cytosol	17.62	34.34
GSMUA_Achr1P05130_001	Banana	cytosol	27.98	27.41
GSMUA_Achr3P20760_001	Banana	extracellular	23.32	22.06
GSMUA_Achr7P06430_001	Banana	plastid	15.03	20.0
PGSC0003DMT400044313	Potato	cytosol	25.39	16.17
PGSC0003DMT400009575	Potato	cytosol	26.94	15.85
Solyc04g080420.2.1	Tomato	cytosol, nucleus	26.94	15.29
Solyc04g080410.1.1	Tomato	cytosol	20.73	12.95
PGSC0003DMT400009447	Potato	cytosol, mitochondrion, plastid	15.54	11.36
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	5.18	6.71

Protein Annotations

EnsemblPlants:GSMUA_Achr8P15130_001	EnsemblPlants:GSMUA_Achr8T15130_001	EnsemblPlantsGene:GSMUA_Achr8G15130_001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR45172	PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915	SUPFAM:SSF51101
UniParc:UPI000296ED36	UniProt:M0TQL6	MapMan:35.1	:	:	:

Description

Putative Mannose/glucose-specific lectin (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G15130_001]

Coordinates

chr8:+:12844910..12846043

Molecular Weight (calculated)

20802.3 Da

IEP (calculated)

8.070

GRAVY (calculated)

0.095

Length

193 amino acids

Sequence
(BLAST)

001: MDLFFTYINN LTCGIPSSQC LMDLSLIKCG NMKGVHHLLP LLLVHTHPYL QMAGEIKVGL WGGNGGSEWD MGAAYRITNI KIRAGDNIDA IVITFTRYGL
101: TETKHFGGSG GTPYEIPLQE DEYLVGVEGS VDTLGRITLV RNLTLRTNKK SYGPFGTSGG KPFSVPVASG KIIGFFGRAG TMIDAIGVYL APN

Best Arabidopsis Sequence Match ( AT3G16410.1 )
(BLAST)

001: MAQKVEAQGG NGGNQWDDGS EYDAVTKIQV AAGGNGIEYV KFTYVKNGQT EEAPLRGVKG RSFEADPFVI NHPEEHLVSV EGRYNPEGLI LGLTFKSNKK
101: TSDLIGYEDG TPFTLQVQDK KIVGFYGFAG NNLHSLGAYF APLTNVTPLN AKKLEAKGGD TGDIWDDGVY DNVRKVYVGQ AQYGIAFVKF EYVNGSQVVV
201: GDEHGKKTEL GVEEFEIDAD DYIVYVEGYR EKVNGMTSEM ITFLSFKTYK GKTSQPIEQR PGIKFVLQGG KIVGFHGRST DVLDSLGAYI SLSPTPNLHG
301: KWTKVDENGD GPGLRCSHDI AQVGNKIYSF GGEFTPNQPI DKHLYVFDIE SRTWSISPAT GDIPTLSCLG VCMVSIGSTL YVFGGRDASR QYNGFYSFDT
401: TTNEWKLLTP VEEGPTPRSF HSMAADEENV YVFGGVSATA RLNTLDSYNI VDKKWFHCST PGDSLTARGG AGLEVVQGKV WVVYGFNGCE VDDVHYYDPV
501: QDKWTQVETF GVRPSERSVF ASAALGKHIV IFGGEIAMDP LAHVGPGQLT DGTFALDTET LQWERLDKFG GEEETPSSRG WTASTTATIG GKKGLVMHGG
601: KAPTNDRFDD LFFYGIDSA

Arabidopsis Description

NSP4Nitrile-specifier protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O04316]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.