Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g080420.2.1 | Tomato | cytosol, nucleus | 85.98 | 82.94 |
| PGSC0003DMT400009447 | Potato | cytosol, mitochondrion, plastid | 52.44 | 65.15 |
| GSMUA_Achr9P10840_001 | Banana | cytosol | 15.85 | 36.62 |
| GSMUA_Achr8P15120_001 | Banana | cytosol | 13.72 | 33.83 |
| TraesCS3B01G032600.1 | Wheat | cytosol | 14.94 | 33.11 |
| TraesCS6A01G105700.1 | Wheat | cytosol | 14.02 | 33.09 |
| TraesCS6B01G135000.1 | Wheat | cytosol | 14.63 | 32.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 11.89 | 31.97 |
| HORVU7Hr1G109850.2 | Barley | cytosol | 15.24 | 31.25 |
| TraesCS7A01G256100.1 | Wheat | cytosol | 14.63 | 30.97 |
| TraesCS3D01G028700.1 | Wheat | cytosol | 13.11 | 30.5 |
| TraesCS3B01G052500.1 | Wheat | cytosol | 13.11 | 30.5 |
| PGSC0003DMT400006433 | Potato | cytosol, nucleus, peroxisome | 12.5 | 30.15 |
| GSMUA_Achr9P10720_001 | Banana | cytosol | 15.85 | 29.89 |
| PGSC0003DMT400006686 | Potato | cytosol | 18.29 | 29.85 |
| TraesCS7D01G254500.1 | Wheat | cytosol | 13.41 | 28.39 |
| TraesCS7B01G152700.1 | Wheat | cytosol | 13.11 | 27.74 |
| HORVU7Hr1G052850.1 | Barley | cytosol | 13.11 | 27.74 |
| TraesCS3D01G030000.1 | Wheat | cytosol | 14.02 | 27.71 |
| GSMUA_Achr8P15130_001 | Banana | cytosol, extracellular, vacuole | 15.85 | 26.94 |
| GSMUA_Achr8P20690_001 | Banana | plastid | 15.55 | 26.56 |
| GSMUA_Achr9P10790_001 | Banana | cytosol | 15.24 | 24.39 |
| TraesCS3A01G131600.1 | Wheat | cytosol | 13.72 | 24.32 |
| PGSC0003DMT400044313 | Potato | cytosol | 20.43 | 22.11 |
| GSMUA_Achr9P10830_001 | Banana | cytosol | 16.16 | 21.72 |
| TraesCS3B01G031800.1 | Wheat | cytosol, plastid | 14.63 | 19.83 |
| GSMUA_AchrUn_... | Banana | extracellular, plastid, vacuole | 15.85 | 18.98 |
| PGSC0003DMT400021541 | Potato | cytosol | 37.5 | 18.81 |
| TraesCS3D01G029200.1 | Wheat | cytosol | 13.11 | 18.3 |
| GSMUA_AchrUn_... | Banana | cytosol | 15.55 | 17.83 |
| TraesCS3B01G165200.1 | Wheat | cytosol | 14.33 | 16.21 |
| TraesCS3B01G053100.1 | Wheat | cytosol, plastid | 9.15 | 15.38 |
| TraesCS1D01G367900.1 | Wheat | cytosol | 14.33 | 14.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400009575 | EnsemblPlantsGene:PGSC0003DMG400003733 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | PGSC:PGSC0003DMG400003733 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI000294E1F2 | UniProt:M0ZWI9 |
| MapMan:35.1 | : | : | : | : | : |
Description
Agglutinin isoform [Source:PGSC_GENE;Acc:PGSC0003DMG400003733]
Coordinates
chr4:-:69798360..69801667
Molecular Weight (calculated)
35996.0 Da
IEP (calculated)
6.522
GRAVY (calculated)
-0.283
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEAWGGSGG SEWNYKFKSP IKEILINHGE IIDSIMFITI NEQGGTIESP RFGGNGGRRD KVVIEAAPLE FLRGIKGTYG NYGGKLVVKS LSFITNGKNI
101: YGPFGKEAGG TPFSFVMKEG GAIVGLHGRA GSYLDAIGIY LKKLTSSKED EKKVEPNEPM VEEIEIHDKM DVMKTIVPRS AGPWGGCSGK GWDDGVFCTI
201: KQVQVHEALH YSAISAIQIE YEKKLDKTSF WSQLHGLEPG AERIIKINVD GTDEFFIGIE GYYSPLDQNG GQDTIRQITF YTNKEKYGPY GIEIGTYFSS
301: SAARGKIVGF HGKSGVFLNA IGVHMEYF
101: YGPFGKEAGG TPFSFVMKEG GAIVGLHGRA GSYLDAIGIY LKKLTSSKED EKKVEPNEPM VEEIEIHDKM DVMKTIVPRS AGPWGGCSGK GWDDGVFCTI
201: KQVQVHEALH YSAISAIQIE YEKKLDKTSF WSQLHGLEPG AERIIKINVD GTDEFFIGIE GYYSPLDQNG GQDTIRQITF YTNKEKYGPY GIEIGTYFSS
301: SAARGKIVGF HGKSGVFLNA IGVHMEYF
001: MDHSTLSIYL LSGNSKDIKS KQKMAQKVEA QGGIGGDVWD DGAHDGVRKV HVGQGLDGVS FINVVYENGS QEVVGGEHGK KSLIGIETFE VDADDYIVAV
101: QVTYDKIFGY DSDIITSITF STFKGKTSPP YGLDTENKFV LKEKNGGKLV GFHGRAGEIL YALGAYFTTT TTPLTPAKKL PAVGGDEGTA WDDGAFDGVK
201: KVYIGQAQDG ISAVKFVYDK GAEDIVGDEH GNDTLLGFEE FQLDYPSEYI TAVEGTYDKI FGFETEVINM LRFKTNKKTS PPFGIEAGTA FELKEEGCKI
301: VGFHGKVSAV LHQFGVHILP VTN
101: QVTYDKIFGY DSDIITSITF STFKGKTSPP YGLDTENKFV LKEKNGGKLV GFHGRAGEIL YALGAYFTTT TTPLTPAKKL PAVGGDEGTA WDDGAFDGVK
201: KVYIGQAQDG ISAVKFVYDK GAEDIVGDEH GNDTLLGFEE FQLDYPSEYI TAVEGTYDKI FGFETEVINM LRFKTNKKTS PPFGIEAGTA FELKEEGCKI
301: VGFHGKVSAV LHQFGVHILP VTN
Arabidopsis Description
ATMLP-300BMyrosinase-binding protein-like protein-300B [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.