Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P10840_001 | Banana | cytosol | 54.1 | 92.96 |
| GSMUA_Achr9P10790_001 | Banana | cytosol | 65.98 | 78.54 |
| GSMUA_Achr9P10720_001 | Banana | cytosol | 37.7 | 52.87 |
| GSMUA_Achr8P15120_001 | Banana | cytosol | 28.69 | 52.63 |
| GSMUA_Achr8P15130_001 | Banana | cytosol, extracellular, vacuole | 40.16 | 50.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.0 | 50.0 |
| GSMUA_Achr8P20690_001 | Banana | plastid | 37.3 | 47.4 |
| GSMUA_AchrUn_... | Banana | extracellular, plastid, vacuole | 42.21 | 37.59 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.44 | 37.06 |
| GSMUA_Achr4P29370_001 | Banana | cytosol | 13.52 | 33.33 |
| GSMUA_Achr3P20760_001 | Banana | extracellular | 20.9 | 25.0 |
| GSMUA_Achr1P05130_001 | Banana | cytosol | 20.08 | 24.87 |
| GSMUA_Achr7P06430_001 | Banana | plastid | 12.3 | 20.69 |
| PGSC0003DMT400044313 | Potato | cytosol | 22.54 | 18.15 |
| Solyc04g080420.2.1 | Tomato | cytosol, nucleus | 22.54 | 16.18 |
| PGSC0003DMT400009575 | Potato | cytosol | 21.72 | 16.16 |
| PGSC0003DMT400009447 | Potato | cytosol, mitochondrion, plastid | 15.98 | 14.77 |
| Solyc04g080410.1.1 | Tomato | cytosol | 16.39 | 12.95 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 3.28 | 5.37 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P10830_001 | EnsemblPlants:GSMUA_Achr9T10830_001 | EnsemblPlantsGene:GSMUA_Achr9G10830_001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | GO:GO:0046872 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant |
| InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 | PFscan:PS51752 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI000296B405 | UniProt:M0TZ92 | MapMan:35.1 | : | : | : |
Description
Putative Horcolin [Source:GMGC_GENE;Acc:GSMUA_Achr9G10830_001]
Coordinates
chr9:+:7055350..7058081
Molecular Weight (calculated)
25861.4 Da
IEP (calculated)
6.022
GRAVY (calculated)
-0.097
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPAYRIISV KIGAGGVVDC MNVTFTYYGG TSHEIVLEED EHAVGMEGEV ATYHGLVFPR TRAVHLHSTP TSQPWRSAIS SLSPSSPTSS SAEEREEFGA
101: HNTMNGAIKV GAWGGNGGSA FDMGPAYRII SVKIFSGDVV DAMDVTFAYY GKTETRHFGG SGGTPHEIVL QEGEYLVGMA GEFANYHGVV VVGKLGFSTN
201: KKSYGPFGNT GGTPFSLPIA AGKISGFFGR DGQFLDAIGV YLEP
101: HNTMNGAIKV GAWGGNGGSA FDMGPAYRII SVKIFSGDVV DAMDVTFAYY GKTETRHFGG SGGTPHEIVL QEGEYLVGMA GEFANYHGVV VVGKLGFSTN
201: KKSYGPFGNT GGTPFSLPIA AGKISGFFGR DGQFLDAIGV YLEP
001: MDQQQQGDKN LTVFVGPWGG NGGTTWDDGI YDGVREIRLV YDHCIDSISV IYDKNGKPAK SEKHGGVGGN KTSEIKLQYP EEYLTGVSGY YCPMVNSGTP
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
101: VIRSMTFKSN KQVYGPYGVE QGTPFTFSVN GGRIVGMNGR SGWYLDSIGF HLSRPKSTKM INKLRKKIHW LTRIVA
Arabidopsis Description
JAL19Jacalin-related lectin 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.