Factsheet for Solyc04g080410.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009447	Potato	cytosol, mitochondrion, plastid	69.26	81.06
Solyc04g080420.2.1	Tomato	cytosol, nucleus	60.19	54.71
GSMUA_Achr9P10840_001	Banana	cytosol	12.62	27.46
TraesCS3B01G032600.1	Wheat	cytosol	12.95	27.03
TraesCS6B01G135000.1	Wheat	cytosol	12.62	26.71
TraesCS6A01G105700.1	Wheat	cytosol	11.33	25.18
TraesCS7A01G256100.1	Wheat	cytosol	12.3	24.52
HORVU7Hr1G109850.2	Barley	cytosol	12.62	24.38
TraesCS3D01G030000.1	Wheat	cytosol	12.62	23.49
GSMUA_Achr9P10720_001	Banana	cytosol	12.95	22.99
GSMUA_AchrUn_...	Banana	cytosol	9.06	22.95
Solyc03g121300.2.1	Tomato	cytosol	14.89	22.89
TraesCS7D01G254500.1	Wheat	cytosol	11.33	22.58
GSMUA_Achr8P15120_001	Banana	cytosol	9.71	22.56
TraesCS3D01G028700.1	Wheat	cytosol	10.03	21.99
TraesCS3B01G052500.1	Wheat	cytosol	10.03	21.99
HORVU7Hr1G052850.1	Barley	cytosol	11.0	21.94
TraesCS7B01G152700.1	Wheat	cytosol	11.0	21.94
GSMUA_Achr8P20690_001	Banana	plastid	13.27	21.35
GSMUA_Achr8P15130_001	Banana	cytosol, extracellular, vacuole	12.95	20.73
GSMUA_Achr9P10790_001	Banana	cytosol	12.62	19.02
Solyc10g078600.1.1	Tomato	cytosol	35.6	16.9
GSMUA_Achr9P10830_001	Banana	cytosol	12.95	16.39
TraesCS3A01G131600.1	Wheat	cytosol	9.71	16.22
GSMUA_AchrUn_...	Banana	extracellular, plastid, vacuole	12.95	14.6
TraesCS3B01G031800.1	Wheat	cytosol, plastid	11.33	14.46
TraesCS3D01G029200.1	Wheat	cytosol	10.68	14.04
GSMUA_AchrUn_...	Banana	cytosol	12.95	13.99
TraesCS1D01G367900.1	Wheat	cytosol	12.95	12.5
TraesCS3B01G165200.1	Wheat	cytosol	10.68	11.38
TraesCS3B01G053100.1	Wheat	cytosol, plastid	6.47	10.26

Protein Annotations

EnsemblPlants:Solyc04g080410.1.1	EnsemblPlantsGene:Solyc04g080410.1	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PFAM:PF01419
PFscan:PS51752	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0002765880	UniProt:K4BVC0	MapMan:35.1

Description

No Description!

Coordinates

chr4:+:64590478..64592592

Molecular Weight (calculated)

34031.6 Da

IEP (calculated)

7.644

GRAVY (calculated)

-0.348

Length

309 amino acids

Sequence
(BLAST)

001: MEYHQPSYDQ AKLMLIEPWG GSNGSEWNYK LTNPIKEIII AHDDNVINSI IFRTIGQEGT IDSPKFGGNG GYKKAKCYGP VGGNEVGGTS FSLVIKENGA
101: ILGFHGRSGA FLYAIGIYLK NVTPPEQIKL LKQPKVEESP DEFPNKMDVM KGIQPRCPGP WGGYSGKGWD DGVFCTIKQV HIYMNTIISA ISGIQIEYEK
201: KDKMSVWSQL HGGFGIGVGN HDNVVKKINI NDENEFLIGI EGYYSLVKEN GGQDTLRQIA FYTNKGKYGP YGSEIGTYFS SSTARGKIVG FHGKSGLFLN
301: AIGVHMEYF

Best Arabidopsis Sequence Match ( AT1G19715.2 )
(BLAST)

001: MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT ICVRSLTFES NRRKYGPFGV DSGTFFALPK
101: SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE
201: KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI
301: KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH NNSGTAQIEN SPWANKLVLA ANGHGEEVDR
401: GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT HRIKFEYPDE SITCISGYYG PLNNSDRYNV
501: VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL F

Arabidopsis Description

JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.