Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021541 | Potato | cytosol | 94.78 | 94.34 |
| KRG98276 | Soybean | cytosol | 51.15 | 56.54 |
| KRH72685 | Soybean | peroxisome | 46.85 | 55.76 |
| KRH30293 | Soybean | cytosol | 49.92 | 55.18 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 55.91 | 54.33 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 49.46 | 53.58 |
| Bra025760.1-P | Field mustard | extracellular | 49.46 | 53.05 |
| Bra016496.1-P | Field mustard | cytosol | 46.85 | 52.32 |
| CDY63700 | Canola | cytosol | 46.85 | 52.14 |
| CDX96652 | Canola | extracellular | 46.85 | 49.59 |
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 44.85 | 48.99 |
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 44.7 | 48.99 |
| KXG33492 | Sorghum | cytosol | 44.09 | 48.64 |
| Os01t0775500-01 | Rice | cytosol, mitochondrion | 25.81 | 48.14 |
| Os05t0508400-01 | Rice | cytoskeleton, cytosol, plastid | 44.39 | 47.85 |
| TraesCS3B01G344800.1 | Wheat | plastid | 32.1 | 46.34 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 41.47 | 46.08 |
| TraesCS1D01G327100.1 | Wheat | cytosol | 41.47 | 46.0 |
| TraesCS3D01G310300.1 | Wheat | plastid | 31.8 | 45.9 |
| HORVU3Hr1G075960.3 | Barley | plastid | 31.64 | 45.88 |
| TraesCS3A01G321000.1 | Wheat | plastid | 31.64 | 45.68 |
| TraesCS1A01G325500.1 | Wheat | cytosol | 41.01 | 44.87 |
| TraesCS1B01G338600.1 | Wheat | cytosol | 41.32 | 44.39 |
| OQU87644 | Sorghum | cytosol | 14.59 | 39.92 |
| Solyc04g080420.2.1 | Tomato | cytosol, nucleus | 19.2 | 36.76 |
| Solyc04g080410.1.1 | Tomato | cytosol | 16.9 | 35.6 |
| Solyc03g121300.2.1 | Tomato | cytosol | 10.6 | 34.33 |
| Zm00001d012640_P010 | Maize | endoplasmic reticulum | 29.65 | 27.07 |
| Os01t0775600-01 | Rice | cytosol | 0.92 | 2.78 |
Protein Annotations
| EnsemblPlants:Solyc10g078600.1.1 | EnsemblPlantsGene:Solyc10g078600.1 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI000276A3D5 | UniProt:K4D2A2 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:60369310..60372523
Molecular Weight (calculated)
70883.4 Da
IEP (calculated)
9.136
GRAVY (calculated)
-0.370
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFEDHGKQT ISVGPWGGEN GLHWDDGVYS TIRKLEIAHG TGVDSIKVEY DKNGTSVISE KHGGGGGAKT DKIILSYPDE FLISMNGYYG SLYERGSVFV
101: RSLTFESNKR TYGPYGVEQG TYFTLPISRG KIVGFHGKCG WYLDAIGVYI EPIHKSLPTH SVAQSQQLHS IGHSHQSIVQ GMETYEYSMI QGSLGKNFDL
201: IVAVRHKEDH NKILPPSVLS RQSSSSDHDT SSIEPTKKVA TLAPAPIERV PSKTVKGVVT YCPWGGSGGN VFDDGIYDGI RQVYLSRNVG IVSVRACYDK
301: NGQAIWGSKN GGTGGFKTEK IIFDYPSEIL THITGYYGPT MIMGPNIIHS LTFHTTKRKH GPYGEEQGQQ FSTKLSDGMI VGFHGRRGMF LDALGVHVLE
401: GKVPPCLPPA PAPNAVKPNA ASVPSLPSSS PLKSNKQVAP IVPSLAPPKP AKPKASSVTE ADDSTQWSFK LGRKGLTDEG VQKIVKDPAP YGPGPWGGEG
501: GKPWDDGVFT GIKQIILTQT SEAISCIEIE YERNGQSVWS VKHGANVGKF TNKVKLEFPH EVLTCITGFY GPISKDMGLK VIKSLTFHTT RRKFGPFGEE
601: LGTYFTSSTT EGKVVGFHGR CGVYVDAIGV HMQHWLGNQR TSKNPLMKMF H
101: RSLTFESNKR TYGPYGVEQG TYFTLPISRG KIVGFHGKCG WYLDAIGVYI EPIHKSLPTH SVAQSQQLHS IGHSHQSIVQ GMETYEYSMI QGSLGKNFDL
201: IVAVRHKEDH NKILPPSVLS RQSSSSDHDT SSIEPTKKVA TLAPAPIERV PSKTVKGVVT YCPWGGSGGN VFDDGIYDGI RQVYLSRNVG IVSVRACYDK
301: NGQAIWGSKN GGTGGFKTEK IIFDYPSEIL THITGYYGPT MIMGPNIIHS LTFHTTKRKH GPYGEEQGQQ FSTKLSDGMI VGFHGRRGMF LDALGVHVLE
401: GKVPPCLPPA PAPNAVKPNA ASVPSLPSSS PLKSNKQVAP IVPSLAPPKP AKPKASSVTE ADDSTQWSFK LGRKGLTDEG VQKIVKDPAP YGPGPWGGEG
501: GKPWDDGVFT GIKQIILTQT SEAISCIEIE YERNGQSVWS VKHGANVGKF TNKVKLEFPH EVLTCITGFY GPISKDMGLK VIKSLTFHTT RRKFGPFGEE
601: LGTYFTSSTT EGKVVGFHGR CGVYVDAIGV HMQHWLGNQR TSKNPLMKMF H
001: MVLTSSYSVE GKPASLGPWG GQSGHAWDDG MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [plastid,cytoskeleton,cytosol]
SUBAcon: [plastid,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.