Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63700 | Canola | cytosol | 75.37 | 77.44 |
| Bra016496.1-P | Field mustard | cytosol | 74.88 | 77.19 |
| CDX96652 | Canola | extracellular | 73.88 | 72.2 |
| KRG98276 | Soybean | cytosol | 56.24 | 57.39 |
| KRH30293 | Soybean | cytosol | 55.41 | 56.54 |
| KRH72685 | Soybean | peroxisome | 50.25 | 55.21 |
| VIT_18s0001g13210.t01 | Wine grape | cytosol | 57.4 | 51.49 |
| Solyc10g078600.1.1 | Tomato | cytosol | 53.58 | 49.46 |
| PGSC0003DMT400021541 | Potato | cytosol | 53.58 | 49.24 |
| KXG33492 | Sorghum | cytosol | 46.59 | 47.46 |
| Os05t0508400-01 | Rice | cytoskeleton, cytosol, plastid | 47.42 | 47.19 |
| Zm00001d038651_P004 | Maize | cytosol, nucleus, plastid | 46.76 | 47.15 |
| OQU78268 | Sorghum | cytosol, nucleus, plastid | 46.59 | 47.14 |
| TraesCS1D01G327100.1 | Wheat | cytosol | 45.09 | 46.17 |
| HORVU1Hr1G075520.2 | Barley | cytosol | 44.76 | 45.9 |
| Os01t0775500-01 | Rice | cytosol, mitochondrion | 26.62 | 45.85 |
| TraesCS1A01G325500.1 | Wheat | cytosol | 44.93 | 45.38 |
| TraesCS1B01G338600.1 | Wheat | cytosol | 44.76 | 44.39 |
| HORVU3Hr1G075960.3 | Barley | plastid | 32.95 | 44.1 |
| TraesCS3B01G344800.1 | Wheat | plastid | 32.95 | 43.9 |
| TraesCS3D01G310300.1 | Wheat | plastid | 32.78 | 43.68 |
| TraesCS3A01G321000.1 | Wheat | plastid | 32.61 | 43.46 |
| AT1G73040.1 | Thale cress | cytosol | 11.81 | 40.34 |
| OQU87644 | Sorghum | cytosol | 14.64 | 36.97 |
| AT2G25980.1 | Thale cress | cytosol | 24.46 | 32.74 |
| AT3G16430.2 | Thale cress | cytosol | 15.64 | 31.76 |
| AT1G52100.1 | Thale cress | cytosol | 22.96 | 31.58 |
| AT3G16420.1 | Thale cress | cytosol | 15.64 | 31.54 |
| AT5G35940.1 | Thale cress | cytosol | 22.63 | 30.63 |
| AT1G52070.1 | Thale cress | extracellular | 15.64 | 29.84 |
| AT5G35950.1 | Thale cress | cytosol | 21.96 | 29.73 |
| AT3G16450.2 | Thale cress | cytosol | 14.81 | 29.67 |
| AT1G52060.1 | Thale cress | extracellular | 15.47 | 29.62 |
| AT2G39310.4 | Thale cress | cytosol | 21.8 | 28.6 |
| AT1G52050.1 | Thale cress | extracellular | 14.81 | 28.43 |
| AT5G28520.1 | Thale cress | cytosol | 20.97 | 27.81 |
| AT3G16440.2 | Thale cress | cytosol | 14.81 | 27.55 |
| AT3G16470.1 | Thale cress | cytosol | 20.63 | 27.49 |
| Zm00001d012640_P010 | Maize | endoplasmic reticulum | 31.28 | 26.37 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 9.65 | 26.24 |
| AT1G52120.2 | Thale cress | cytosol | 19.97 | 26.14 |
| AT2G39330.2 | Thale cress | cytosol | 21.63 | 25.64 |
| AT3G21380.1 | Thale cress | cytosol | 18.8 | 24.57 |
| AT1G61230.1 | Thale cress | cytosol | 19.47 | 23.17 |
| AT5G46000.1 | Thale cress | cytosol | 15.14 | 22.98 |
| AT1G57570.1 | Thale cress | mitochondrion | 22.3 | 21.82 |
| AT1G60110.2 | Thale cress | cytosol | 22.3 | 21.54 |
| AT5G49870.1 | Thale cress | cytosol | 21.3 | 21.3 |
| AT1G60095.1 | Thale cress | cytosol | 21.13 | 21.13 |
| AT1G52030.2 | Thale cress | cytosol | 21.96 | 20.56 |
| AT5G38550.1 | Thale cress | cytosol | 20.3 | 20.54 |
| AT1G52110.1 | Thale cress | mitochondrion | 20.97 | 20.49 |
| AT5G49850.1 | Thale cress | cytosol | 20.3 | 20.47 |
| AT1G60130.1 | Thale cress | cytosol | 20.3 | 20.33 |
| AT5G38540.1 | Thale cress | cytosol | 15.47 | 19.87 |
| AT1G52130.1 | Thale cress | cytosol | 15.14 | 18.84 |
| AT3G16460.1 | Thale cress | cytosol | 21.13 | 18.01 |
| AT1G52040.1 | Thale cress | cytosol | 13.81 | 17.97 |
| AT1G33790.2 | Thale cress | cytosol | 22.13 | 17.85 |
| AT1G52000.2 | Thale cress | cytosol | 20.47 | 16.85 |
| Os01t0775600-01 | Rice | cytosol | 0.67 | 1.85 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:838560 | ProteinID:AAG12566.1 | ProteinID:AEE29888.1 | ProteinID:AEE29889.1 |
| ProteinID:AEE29890.1 | ArrayExpress:AT1G19715 | EnsemblPlantsGene:AT1G19715 | RefSeq:AT1G19715 | TAIR:AT1G19715 | RefSeq:AT1G19715-TAIR-G |
| EnsemblPlants:AT1G19715.3 | TAIR:AT1G19715.3 | EMBL:AY062497 | EMBL:AY075593 | Unigene:At.47209 | EMBL:BT000110 |
| UniProt:F4HQX1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 |
| InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001117315.1 | RefSeq:NP_001185041.1 | RefSeq:NP_849691.1 |
| PFAM:PF01419 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51752 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0001E92AEB | SEG:seg |
Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
Coordinates
chr1:-:6816896..6819513
Molecular Weight (calculated)
65649.0 Da
IEP (calculated)
8.871
GRAVY (calculated)
-0.484
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLTSSYSVE GKPASLGPWG GQSGHAWDDG MYTTVKQIII AHGSGIDSIQ IEYDKNGSSV WSEKRGGKGG KKFDKVKFDY PHEYLISVNG TYGSFDVWGT
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
101: ICVRSLTFES NRRKYGPFGV DSGTFFALPK SGSKIIGFHG KAGWYLDAIG VHTQPIPKEN NPSSKILLHS HQSFSQGDKK HEYSVLQGSV GQNFDIVVTL
201: RKKDPTLPSF ESRDSAGAEV TKHKLVTDTE KSQSKIEGGA KTYGPWGGTG GIMFDDGIYT GIRQINLSRN VGIVSMKVCY DFRGQAVWGS KHGGVGGFKH
301: DKIVFDYPSE VLTHVTGTYG PLMYMGPNVI KSLTFRTNRG KHGPYGEEQG PSFTHQMDEG KVVGFLGREG LFLDSIGVHV MECKISSLKP SSPHNAIVPH
401: NNSGTAQIEN SPWANKLVLA ANGHGEEVDR GVVKEPTPSG PGPWGGDGGQ AWDDGVFSGI KQIFVTRGND AITSIQIEYD RNGQSVWSIK HGGDSNGVAT
501: HRIKFEYPDE SITCISGYYG PLNNSDRYNV VKSLSFYTSR GRYGPYGEET GTFFTSTTTQ GKVLGFHGRS SFHLDAIGVH MQHWLGNNKS YYSRASCFKL
601: F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.