Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G49860.1 | Thale cress | cytosol, plastid | 31.61 | 85.97 |
| AT5G49850.1 | Thale cress | cytosol | 76.21 | 76.85 |
| AT1G52110.1 | Thale cress | mitochondrion | 68.55 | 66.99 |
| CDY69096 | Canola | cytosol | 56.07 | 57.61 |
| CDY60590 | Canola | cytosol | 56.07 | 57.61 |
| Bra018945.1-P | Field mustard | cytosol | 48.75 | 55.6 |
| AT1G60095.1 | Thale cress | cytosol | 55.07 | 55.07 |
| CDY34134 | Canola | cytosol | 18.64 | 53.85 |
| AT1G60130.1 | Thale cress | cytosol | 53.74 | 53.83 |
| AT1G61230.1 | Thale cress | cytosol | 44.43 | 52.87 |
| AT1G60110.2 | Thale cress | cytosol | 54.41 | 52.57 |
| AT2G25980.1 | Thale cress | cytosol | 37.94 | 50.78 |
| AT5G35940.1 | Thale cress | cytosol | 36.94 | 50.0 |
| AT5G35950.1 | Thale cress | cytosol | 36.77 | 49.77 |
| AT1G57570.1 | Thale cress | mitochondrion | 50.08 | 49.02 |
| AT5G38550.1 | Thale cress | cytosol | 48.42 | 48.99 |
| AT5G38540.1 | Thale cress | cytosol | 37.77 | 48.5 |
| AT3G16430.2 | Thale cress | cytosol | 23.63 | 47.97 |
| AT3G16420.1 | Thale cress | cytosol | 23.63 | 47.65 |
| AT1G52130.1 | Thale cress | cytosol | 38.1 | 47.41 |
| AT1G52100.1 | Thale cress | cytosol | 34.44 | 47.37 |
| CDY47824 | Canola | cytosol | 27.95 | 47.06 |
| AT3G16450.2 | Thale cress | cytosol | 21.96 | 44.0 |
| AT5G28520.1 | Thale cress | cytosol | 32.95 | 43.71 |
| AT1G52050.1 | Thale cress | extracellular | 22.63 | 43.45 |
| AT3G16440.2 | Thale cress | cytosol | 23.29 | 43.34 |
| AT1G52060.1 | Thale cress | extracellular | 22.3 | 42.68 |
| AT1G52070.1 | Thale cress | extracellular | 22.13 | 42.22 |
| AT2G39310.4 | Thale cress | cytosol | 29.12 | 38.21 |
| AT3G16470.1 | Thale cress | cytosol | 28.29 | 37.69 |
| AT1G33790.2 | Thale cress | cytosol | 46.09 | 37.18 |
| AT1G52120.2 | Thale cress | cytosol | 26.96 | 35.29 |
| AT3G21380.1 | Thale cress | cytosol | 26.79 | 35.0 |
| AT2G39330.2 | Thale cress | cytosol | 29.28 | 34.71 |
| AT5G46000.1 | Thale cress | cytosol | 19.47 | 29.55 |
| AT3G16460.1 | Thale cress | cytosol | 33.94 | 28.94 |
| AT1G52030.2 | Thale cress | cytosol | 26.46 | 24.77 |
| AT1G73040.1 | Thale cress | cytosol | 6.82 | 23.3 |
| AT1G52040.1 | Thale cress | cytosol | 16.47 | 21.43 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 21.3 | 21.3 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 5.16 | 20.81 |
| AT1G52000.2 | Thale cress | cytosol | 21.63 | 17.81 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:835050 | ProteinID:AED95866.1 | EMBL:AF367353 | ProteinID:ANM71089.1 |
| ArrayExpress:AT5G49870 | EnsemblPlantsGene:AT5G49870 | RefSeq:AT5G49870 | TAIR:AT5G49870 | RefSeq:AT5G49870-TAIR-G | EnsemblPlants:AT5G49870.1 |
| TAIR:AT5G49870.1 | EMBL:AY093991 | Unigene:At.28734 | ProteinID:BAA97008.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| RefSeq:NP_001318770.1 | RefSeq:NP_199798.1 | PFAM:PF01419 | PO:PO:0009005 | PFscan:PS51752 | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | UniProt:Q9LTY2 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI00000A7C9B | SEG:seg |
Description
JAL48Jacalin-related lectin 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY2]
Coordinates
chr5:-:20270101..20272895
Molecular Weight (calculated)
67103.0 Da
IEP (calculated)
6.347
GRAVY (calculated)
-0.446
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MTERLEAEGS RRGNNSKWDD KSDHDDVTKI YVNYSLSGIE SIRFDYVKSG KPKDGPFRGQ SYNTYTHTFE INHLKYEHLE SVEGYYTEDT GIEALQFKTN
101: LRISEPIGYH HDGCTKFILA VEGKKIIGFH GSSFALRVGS LGAYFTWDTP TIIKAVGGKV GTKWDDGVNQ AGFTKIHVRS GQKGIQFIKL EYVDKDGNLT
201: DGPIHGSIYR RGSPHVFEFK HDEEYLVSVE GYYEGDEECE VIQGLQFRTN IKTSELMGSN TGKKFKLTAS GMKIVGFHGY AEKNLSSLGA YLTPLTPKKS
301: ECKGITDGSN VWNWDDGAFE GIRKVSVFFT ALRIRCLMIN YEDAGKVVKR SHGLNNNDHQ EEKFVVDYPN EFITSVVGTM SSSSVMPLIF KTSKGRTSKQ
401: FGDYSFDDSV EFVLESKGCA IVGFHGWHNP VSGYMTALGA YYYPMPLPPA AEKLEAQGGA GGAPWDDGSN FQGVRKIYIG TGEVGIVSIK FLYENDVHEI
501: VVGDHHGNKN LLRHEEFDLD YPSEYLTSVE GSYDVVPGSE EYEVIIMLKF TTNKRTSPCY GLDDDPIFVL HKEGHKIVGF HGKSSNMLHK LGIHVLPISN
601: S
101: LRISEPIGYH HDGCTKFILA VEGKKIIGFH GSSFALRVGS LGAYFTWDTP TIIKAVGGKV GTKWDDGVNQ AGFTKIHVRS GQKGIQFIKL EYVDKDGNLT
201: DGPIHGSIYR RGSPHVFEFK HDEEYLVSVE GYYEGDEECE VIQGLQFRTN IKTSELMGSN TGKKFKLTAS GMKIVGFHGY AEKNLSSLGA YLTPLTPKKS
301: ECKGITDGSN VWNWDDGAFE GIRKVSVFFT ALRIRCLMIN YEDAGKVVKR SHGLNNNDHQ EEKFVVDYPN EFITSVVGTM SSSSVMPLIF KTSKGRTSKQ
401: FGDYSFDDSV EFVLESKGCA IVGFHGWHNP VSGYMTALGA YYYPMPLPPA AEKLEAQGGA GGAPWDDGSN FQGVRKIYIG TGEVGIVSIK FLYENDVHEI
501: VVGDHHGNKN LLRHEEFDLD YPSEYLTSVE GSYDVVPGSE EYEVIIMLKF TTNKRTSPCY GLDDDPIFVL HKEGHKIVGF HGKSSNMLHK LGIHVLPISN
601: S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.