Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- extracellular 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90860 | Canola | cytosol | 55.41 | 65.03 |
| AT2G25980.1 | Thale cress | cytosol | 53.64 | 54.12 |
| AT3G16430.2 | Thale cress | cytosol | 33.55 | 51.35 |
| AT3G16420.1 | Thale cress | cytosol | 33.77 | 51.34 |
| AT1G52100.1 | Thale cress | cytosol | 47.46 | 49.2 |
| AT5G35940.1 | Thale cress | cytosol | 47.02 | 47.97 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 23.4 | 47.96 |
| AT5G35950.1 | Thale cress | cytosol | 46.8 | 47.75 |
| AT3G16450.2 | Thale cress | cytosol | 31.13 | 47.0 |
| AT1G52060.1 | Thale cress | extracellular | 31.57 | 45.54 |
| AT1G52070.1 | Thale cress | extracellular | 31.35 | 45.08 |
| AT1G52050.1 | Thale cress | extracellular | 31.13 | 45.05 |
| AT3G16440.2 | Thale cress | cytosol | 31.57 | 44.27 |
| AT1G61230.1 | Thale cress | cytosol | 45.25 | 40.59 |
| AT2G39310.4 | Thale cress | cytosol | 40.18 | 39.74 |
| AT1G33790.2 | Thale cress | cytosol | 63.58 | 38.66 |
| AT1G57570.1 | Thale cress | mitochondrion | 50.33 | 37.13 |
| AT1G52120.2 | Thale cress | cytosol | 37.31 | 36.82 |
| AT2G39330.2 | Thale cress | cytosol | 40.4 | 36.09 |
| AT3G21380.1 | Thale cress | cytosol | 36.64 | 36.09 |
| AT3G16470.1 | Thale cress | cytosol | 35.76 | 35.92 |
| AT1G60095.1 | Thale cress | cytosol | 46.14 | 34.78 |
| AT5G38550.1 | Thale cress | cytosol | 45.25 | 34.51 |
| AT1G60130.1 | Thale cress | cytosol | 44.81 | 33.83 |
| AT1G60110.2 | Thale cress | cytosol | 46.36 | 33.76 |
| AT5G49850.1 | Thale cress | cytosol | 43.49 | 33.05 |
| AT5G49870.1 | Thale cress | cytosol | 43.71 | 32.95 |
| AT1G52110.1 | Thale cress | mitochondrion | 44.37 | 32.68 |
| AT5G38540.1 | Thale cress | cytosol | 33.11 | 32.05 |
| AT5G46000.1 | Thale cress | cytosol | 27.15 | 31.06 |
| AT1G52130.1 | Thale cress | cytosol | 30.68 | 28.78 |
| AT3G16460.1 | Thale cress | cytosol | 43.71 | 28.09 |
| AT1G52030.2 | Thale cress | cytosol | 35.1 | 24.77 |
| AT1G73040.1 | Thale cress | cytosol | 9.49 | 24.43 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 7.51 | 22.82 |
| AT1G52040.1 | Thale cress | cytosol | 23.18 | 22.73 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 27.81 | 20.97 |
| AT1G52000.2 | Thale cress | cytosol | 29.58 | 18.36 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:832945 | UniProt:A0A178U7N2 | ProteinID:AAF88016.1 | ProteinID:AED93810.1 |
| ProteinID:ANM68398.1 | ArrayExpress:AT5G28520 | EnsemblPlantsGene:AT5G28520 | RefSeq:AT5G28520 | TAIR:AT5G28520 | RefSeq:AT5G28520-TAIR-G |
| EnsemblPlants:AT5G28520.1 | TAIR:AT5G28520.1 | Unigene:At.55069 | EMBL:DQ446994 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| RefSeq:NP_001330158.1 | RefSeq:NP_198204.3 | ProteinID:OAO89649.1 | PFAM:PF01419 | PO:PO:0009052 | PO:PO:0020127 |
| PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | UniProt:Q9LKR6 | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI000009F99A | SEG:seg | : | : | : | : |
Description
JAL40Jacalin-related lectin 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKR6]
Coordinates
chr5:+:10493110..10495011
Molecular Weight (calculated)
50208.3 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.452
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKLEAIGR GLQWDDSSDH DNVTKILVRG GREGIQYVKF DYVKSGQPQT GLIHGLSGRG GFTQTFEIDQ KDEHLVSVEG YYDVTKGVIQ ALKFKTNKKT
101: SEMIGYDDTG IKLSLEVKGK KIIGFHGYAE TNLNSLGAYF TTTGPIGLNP QVGHIKLAYQ GGGGGIPWDH GPNHNGVKRV SFIFDENEIR QWRVDYDDGG
201: VIRQYEPING YDMFEVKEYP TEYIISVECT YDDVIPRSGR RMIRSIMFKT SKGRVSPIFG YPAARKFVLE NNGGALIGFH GRVGAGIDAL GAYFSSFIPS
301: PPPPSPEKLQ PEGGEAVGDP WDDGIFNGVR EIHLEDGEGI ALKFVYDKDV QVTELKVHGE PSGIGFNEFK LDYPSEYITT VEGFWDKTSG NERGVITRLR
401: FTTNKQTFRP VGLESTTSFS LGKEGYKIVG FHGNSSTDKL HQLGVYVVPI TRE
101: SEMIGYDDTG IKLSLEVKGK KIIGFHGYAE TNLNSLGAYF TTTGPIGLNP QVGHIKLAYQ GGGGGIPWDH GPNHNGVKRV SFIFDENEIR QWRVDYDDGG
201: VIRQYEPING YDMFEVKEYP TEYIISVECT YDDVIPRSGR RMIRSIMFKT SKGRVSPIFG YPAARKFVLE NNGGALIGFH GRVGAGIDAL GAYFSSFIPS
301: PPPPSPEKLQ PEGGEAVGDP WDDGIFNGVR EIHLEDGEGI ALKFVYDKDV QVTELKVHGE PSGIGFNEFK LDYPSEYITT VEGFWDKTSG NERGVITRLR
401: FTTNKQTFRP VGLESTTSFS LGKEGYKIVG FHGNSSTDKL HQLGVYVVPI TRE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.