Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G38540.1 | Thale cress | cytosol | 65.49 | 83.12 |
| AT1G60095.1 | Thale cress | cytosol | 52.69 | 52.08 |
| AT1G60130.1 | Thale cress | cytosol | 52.19 | 51.67 |
| AT1G61230.1 | Thale cress | cytosol | 43.43 | 51.09 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 18.69 | 50.23 |
| AT1G57570.1 | Thale cress | mitochondrion | 51.35 | 49.67 |
| AT1G60110.2 | Thale cress | cytosol | 51.85 | 49.52 |
| AT1G52130.1 | Thale cress | cytosol | 39.56 | 48.65 |
| AT5G49850.1 | Thale cress | cytosol | 48.65 | 48.49 |
| AT5G49870.1 | Thale cress | cytosol | 48.99 | 48.42 |
| AT2G25980.1 | Thale cress | cytosol | 36.53 | 48.33 |
| AT1G52110.1 | Thale cress | mitochondrion | 49.33 | 47.64 |
| AT5G35940.1 | Thale cress | cytosol | 35.19 | 47.07 |
| AT5G35950.1 | Thale cress | cytosol | 34.51 | 46.17 |
| AT1G52100.1 | Thale cress | cytosol | 33.84 | 46.0 |
| AT5G28520.1 | Thale cress | cytosol | 34.51 | 45.25 |
| AT3G16430.2 | Thale cress | cytosol | 22.05 | 44.26 |
| AT3G16450.2 | Thale cress | cytosol | 21.72 | 43.0 |
| AT3G16420.1 | Thale cress | cytosol | 21.38 | 42.62 |
| AT1G52070.1 | Thale cress | extracellular | 21.89 | 41.27 |
| AT3G16440.2 | Thale cress | cytosol | 22.39 | 41.18 |
| AT1G52060.1 | Thale cress | extracellular | 21.72 | 41.08 |
| AT1G33790.2 | Thale cress | cytosol | 49.33 | 39.33 |
| AT1G52050.1 | Thale cress | extracellular | 20.71 | 39.3 |
| AT2G39310.4 | Thale cress | cytosol | 29.12 | 37.77 |
| AT1G52120.2 | Thale cress | cytosol | 28.96 | 37.47 |
| AT3G21380.1 | Thale cress | cytosol | 28.62 | 36.96 |
| AT3G16470.1 | Thale cress | cytosol | 27.95 | 36.81 |
| AT2G39330.2 | Thale cress | cytosol | 28.79 | 33.73 |
| AT5G46000.1 | Thale cress | cytosol | 19.87 | 29.8 |
| AT3G16460.1 | Thale cress | cytosol | 34.51 | 29.08 |
| AT1G52030.2 | Thale cress | cytosol | 27.78 | 25.7 |
| AT1G73040.1 | Thale cress | cytosol | 6.9 | 23.3 |
| AT1G52040.1 | Thale cress | cytosol | 16.67 | 21.43 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 20.54 | 20.3 |
| AT1G52000.2 | Thale cress | cytosol | 21.89 | 17.81 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 4.21 | 16.78 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:833843 | ProteinID:AED94333.1 | ArrayExpress:AT5G38550 | EnsemblPlantsGene:AT5G38550 |
| RefSeq:AT5G38550 | TAIR:AT5G38550 | RefSeq:AT5G38550-TAIR-G | EnsemblPlants:AT5G38550.1 | TAIR:AT5G38550.1 | Unigene:At.30402 |
| ProteinID:BAB10145.1 | EMBL:BT004048 | EMBL:BT004998 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_198671.1 |
| PFAM:PF01419 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | UniProt:Q9FFW6 | SMART:SM00915 |
| SUPFAM:SSF51101 | UniParc:UPI000000C251 | SEG:seg | : | : | : |
Description
JAL44Jacalin-related lectin 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW6]
Coordinates
chr5:-:15432781..15435851
Molecular Weight (calculated)
66442.4 Da
IEP (calculated)
7.546
GRAVY (calculated)
-0.472
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQKLGAKGI KSDERNQREW DDGSEHDDVT KIYVRGGREG IRSIYFNYVK NGKPKDGSIH GYFDSGFTQT FEINHLRGEY LESVDAYYDK KSYGMQAIQF
101: KTNFRTSELM GYSYECTMFT LAVQGKKIIG FHGSNYVHIL SLGAYFISIA PTRLEVKGSK GSKKWDDGFD HENVSKIEVL GGFEGILYIK VDYIKNGKLE
201: TGLVHGHSGG DGFLQKMEIN QSKNEYLVYV EGYYDDASET IQGLHFQTNL NNPVMMGYKK GRKFLLASNG NKIIGFHGYA DKSLNSLGAY FSTTTPNKLE
301: CQGDRKGLPW DDGCNYDGVK KVYVDSISDI DSVRFEYDNG GKVEKTPYRR DVTNEKEFVL DYPNEFITSV EGTLATPTNF DITWILSLTF KTSKGRTSPT
401: FGSSSPGRKF VLEKNGSALV GFHGYIGPGY NIKALGAYYR PIPPTPDVKR LEAQGGDGGA SWDDGGTFNS VRKIYIGLGK NVVGFVKFLY YKNARVVIGD
501: DHGNKTLSSD LLEFLLDPFE HIISVEGTYD DTSGGITMLR FETNLQKSPY FGFGTTSNFL LHKDNHQIVG FHGKSSNMLH QLGVHVIPNG FKFI
101: KTNFRTSELM GYSYECTMFT LAVQGKKIIG FHGSNYVHIL SLGAYFISIA PTRLEVKGSK GSKKWDDGFD HENVSKIEVL GGFEGILYIK VDYIKNGKLE
201: TGLVHGHSGG DGFLQKMEIN QSKNEYLVYV EGYYDDASET IQGLHFQTNL NNPVMMGYKK GRKFLLASNG NKIIGFHGYA DKSLNSLGAY FSTTTPNKLE
301: CQGDRKGLPW DDGCNYDGVK KVYVDSISDI DSVRFEYDNG GKVEKTPYRR DVTNEKEFVL DYPNEFITSV EGTLATPTNF DITWILSLTF KTSKGRTSPT
401: FGSSSPGRKF VLEKNGSALV GFHGYIGPGY NIKALGAYYR PIPPTPDVKR LEAQGGDGGA SWDDGGTFNS VRKIYIGLGK NVVGFVKFLY YKNARVVIGD
501: DHGNKTLSSD LLEFLLDPFE HIISVEGTYD DTSGGITMLR FETNLQKSPY FGFGTTSNFL LHKDNHQIVG FHGKSSNMLH QLGVHVIPNG FKFI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.