Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G60130.1 | Thale cress | cytosol | 70.22 | 70.33 |
| AT1G60110.2 | Thale cress | cytosol | 71.71 | 69.29 |
| CDY60590 | Canola | cytosol | 57.24 | 58.8 |
| CDY69096 | Canola | cytosol | 57.07 | 58.63 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 21.13 | 57.47 |
| Bra018945.1-P | Field mustard | cytosol | 49.92 | 56.93 |
| AT1G61230.1 | Thale cress | cytosol | 46.42 | 55.25 |
| AT5G49870.1 | Thale cress | cytosol | 55.07 | 55.07 |
| AT5G49850.1 | Thale cress | cytosol | 53.74 | 54.19 |
| AT2G25980.1 | Thale cress | cytosol | 40.1 | 53.67 |
| AT1G52130.1 | Thale cress | cytosol | 42.43 | 52.8 |
| AT5G38550.1 | Thale cress | cytosol | 52.08 | 52.69 |
| AT1G52110.1 | Thale cress | mitochondrion | 53.74 | 52.52 |
| AT1G57570.1 | Thale cress | mitochondrion | 53.24 | 52.12 |
| AT5G35940.1 | Thale cress | cytosol | 38.1 | 51.58 |
| AT1G52100.1 | Thale cress | cytosol | 37.44 | 51.49 |
| AT3G16430.2 | Thale cress | cytosol | 25.12 | 51.01 |
| CDY34134 | Canola | cytosol | 17.64 | 50.96 |
| AT5G35950.1 | Thale cress | cytosol | 37.27 | 50.45 |
| AT5G38540.1 | Thale cress | cytosol | 39.27 | 50.43 |
| AT3G16420.1 | Thale cress | cytosol | 24.63 | 49.66 |
| AT1G52060.1 | Thale cress | extracellular | 24.63 | 47.13 |
| AT1G52070.1 | Thale cress | extracellular | 24.29 | 46.35 |
| AT5G28520.1 | Thale cress | cytosol | 34.78 | 46.14 |
| AT1G52050.1 | Thale cress | extracellular | 23.79 | 45.69 |
| AT3G16440.2 | Thale cress | cytosol | 24.29 | 45.2 |
| CDY47824 | Canola | cytosol | 26.62 | 44.82 |
| AT3G16450.2 | Thale cress | cytosol | 22.13 | 44.33 |
| AT1G33790.2 | Thale cress | cytosol | 50.92 | 41.07 |
| AT2G39310.4 | Thale cress | cytosol | 30.95 | 40.61 |
| AT3G16470.1 | Thale cress | cytosol | 28.79 | 38.36 |
| AT3G21380.1 | Thale cress | cytosol | 28.79 | 37.61 |
| AT2G39330.2 | Thale cress | cytosol | 31.11 | 36.88 |
| AT1G52120.2 | Thale cress | cytosol | 26.96 | 35.29 |
| AT5G46000.1 | Thale cress | cytosol | 21.46 | 32.58 |
| AT3G16460.1 | Thale cress | cytosol | 36.61 | 31.21 |
| AT1G52030.2 | Thale cress | cytosol | 28.62 | 26.79 |
| AT1G73040.1 | Thale cress | cytosol | 6.99 | 23.86 |
| AT1G52040.1 | Thale cress | cytosol | 16.97 | 22.08 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 21.13 | 21.13 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 4.83 | 19.46 |
| AT1G52000.2 | Thale cress | cytosol | 21.96 | 18.08 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:842305 | UniProt:A0A2H1ZEE8 | ProteinID:AEE33659.2 | ArrayExpress:AT1G60095 |
| EnsemblPlantsGene:AT1G60095 | RefSeq:AT1G60095 | TAIR:AT1G60095 | RefSeq:AT1G60095-TAIR-G | EnsemblPlants:AT1G60095.1 | TAIR:AT1G60095.1 |
| Unigene:At.52280 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 |
| InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | RefSeq:NP_001319273.1 | PFAM:PF01419 | PFscan:PS51752 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI000848F17F | SEG:seg |
Description
Mannose-binding lectin superfamily protein [Source:TAIR;Acc:AT1G60095]
Coordinates
chr1:+:22159694..22162426
Molecular Weight (calculated)
67128.7 Da
IEP (calculated)
5.400
GRAVY (calculated)
-0.466
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQDSNMFER LEAQGKIDSS SDYKWDDGSE HDDVTKIYVS FGKECIRNIR FDYIKSGQPK YGSFHGPTFQ GLLQTFEIDH KKDEQLVSVE GYCKPGSDLI
101: QGVQFKTNLR ISEIIGFEKA IFGNPTTFSL AEDGKKIIGF HGYSMANLNS LGAYFTWISP TKMEAKGGKG GTEWNDGAEH EGFTKIYVQG GCDGIQYIKF
201: DYVKDGQHKY GSPHGVKGSE STEPFEINHL DKEYLISVEG YYDEGDSGVI QGIQFKTNIK TSELIGDKKG RKFSLAANGK KIIGFHGYAD KNLNSLGAYF
301: TTSPLISLEH TTGSDLVNHI WDDGSFEGVR KVYVRYDSLE ICYVEFDYDN KGKVEKREHG MFYSWVQQGE FVVDYPNEFI TSVEGTMRTE SFMQVASLTF
401: KTSKGRTSST FGSPSDSKFL LESKGCGVVG FYGRCFSSIF DLGAYFRPLP PPSNTEKVEA KGGDGGASWD DGGFDGIRNI YIGHNKMGIA FVKFLYDKDS
501: QIVVGDDHGS NTLLRVDEFE LEHPGEYLIS VEGSYDVVDG SESEVIRMLR FKTNLRTSQL FGHETTPSFI LEKECHKIVG FHGKIGKMLH QIGVNVLPIT
601: D
101: QGVQFKTNLR ISEIIGFEKA IFGNPTTFSL AEDGKKIIGF HGYSMANLNS LGAYFTWISP TKMEAKGGKG GTEWNDGAEH EGFTKIYVQG GCDGIQYIKF
201: DYVKDGQHKY GSPHGVKGSE STEPFEINHL DKEYLISVEG YYDEGDSGVI QGIQFKTNIK TSELIGDKKG RKFSLAANGK KIIGFHGYAD KNLNSLGAYF
301: TTSPLISLEH TTGSDLVNHI WDDGSFEGVR KVYVRYDSLE ICYVEFDYDN KGKVEKREHG MFYSWVQQGE FVVDYPNEFI TSVEGTMRTE SFMQVASLTF
401: KTSKGRTSST FGSPSDSKFL LESKGCGVVG FYGRCFSSIF DLGAYFRPLP PPSNTEKVEA KGGDGGASWD DGGFDGIRNI YIGHNKMGIA FVKFLYDKDS
501: QIVVGDDHGS NTLLRVDEFE LEHPGEYLIS VEGSYDVVDG SESEVIRMLR FKTNLRTSQL FGHETTPSFI LEKECHKIVG FHGKIGKMLH QIGVNVLPIT
601: D
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.