Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G52030.2 | Thale cress | cytosol | 69.26 | 49.84 |
| AT5G49860.1 | Thale cress | cytosol, plastid | 17.1 | 35.75 |
| AT1G52000.2 | Thale cress | cytosol | 52.81 | 33.42 |
| AT3G16450.2 | Thale cress | cytosol | 20.56 | 31.67 |
| AT3G16440.2 | Thale cress | cytosol | 19.48 | 27.86 |
| AT3G21380.1 | Thale cress | cytosol | 27.27 | 27.39 |
| AT1G52120.2 | Thale cress | cytosol | 26.84 | 27.02 |
| AT2G39310.4 | Thale cress | cytosol | 26.62 | 26.86 |
| AT3G16470.1 | Thale cress | cytosol | 25.54 | 26.16 |
| AT5G35940.1 | Thale cress | cytosol | 25.11 | 26.13 |
| AT5G35950.1 | Thale cress | cytosol | 24.89 | 25.9 |
| AT1G52100.1 | Thale cress | cytosol | 24.24 | 25.63 |
| AT2G25980.1 | Thale cress | cytosol | 24.89 | 25.61 |
| AT2G39330.2 | Thale cress | cytosol | 27.06 | 24.65 |
| CDX77840 | Canola | cytosol | 4.98 | 24.21 |
| AT5G28520.1 | Thale cress | cytosol | 22.73 | 23.18 |
| AT3G16430.2 | Thale cress | cytosol | 13.64 | 21.28 |
| AT3G16420.1 | Thale cress | cytosol | 13.64 | 21.14 |
| AT1G61230.1 | Thale cress | cytosol | 22.08 | 20.2 |
| AT1G52050.1 | Thale cress | extracellular | 12.55 | 18.53 |
| AT5G46000.1 | Thale cress | cytosol | 15.58 | 18.18 |
| AT1G60130.1 | Thale cress | cytosol | 22.94 | 17.67 |
| AT1G60095.1 | Thale cress | cytosol | 22.08 | 16.97 |
| AT1G52060.1 | Thale cress | extracellular | 11.47 | 16.88 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 5.41 | 16.78 |
| AT1G57570.1 | Thale cress | mitochondrion | 22.29 | 16.78 |
| AT5G38550.1 | Thale cress | cytosol | 21.43 | 16.67 |
| AT1G52070.1 | Thale cress | extracellular | 11.26 | 16.51 |
| AT5G49870.1 | Thale cress | cytosol | 21.43 | 16.47 |
| AT1G60110.2 | Thale cress | cytosol | 22.08 | 16.4 |
| AT3G16460.1 | Thale cress | cytosol | 24.68 | 16.17 |
| AT5G49850.1 | Thale cress | cytosol | 20.56 | 15.94 |
| AT1G52110.1 | Thale cress | mitochondrion | 21.21 | 15.94 |
| AT1G33790.2 | Thale cress | cytosol | 25.54 | 15.84 |
| AT1G19715.3 | Thale cress | cytoskeleton, cytosol, plastid | 17.97 | 13.81 |
| AT5G38540.1 | Thale cress | cytosol | 11.47 | 11.32 |
| AT1G52130.1 | Thale cress | cytosol | 11.04 | 10.56 |
| AT1G73040.1 | Thale cress | cytosol | 3.25 | 8.52 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | EntrezGene:841633 | ProteinID:AAD12678.1 | ProteinID:AEE32749.1 | ArrayExpress:AT1G52040 |
| EnsemblPlantsGene:AT1G52040 | RefSeq:AT1G52040 | TAIR:AT1G52040 | RefSeq:AT1G52040-TAIR-G | EnsemblPlants:AT1G52040.1 | TAIR:AT1G52040.1 |
| EMBL:AY048265 | EMBL:AY090380 | Unigene:At.10569 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0030246 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom |
| InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | Symbol:MBP1 | RefSeq:NP_175616.1 | PFAM:PF01419 | PO:PO:0000293 |
| PO:PO:0001170 | PO:PO:0007131 | PO:PO:0009001 | PO:PO:0009015 | PO:PO:0009025 | PO:PO:0009046 |
| PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | UniProt:Q9SAV0 | SMART:SM00915 | SUPFAM:SSF51101 |
| UniParc:UPI000000115D | SEG:seg | : | : | : | : |
Description
MBP1Myrosinase-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV0]
Coordinates
chr1:-:19350314..19352791
Molecular Weight (calculated)
50169.5 Da
IEP (calculated)
5.326
GRAVY (calculated)
-0.415
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTGGPQKLE AQGGKEGKEW DDGAEHDGVT KIYVAAGGLG IEQIRFDYVK NGQPKEGSFH GVKGRSTIST IEISHPAEYL ISMEGWYDST NIIQGIQFKS
101: NKHTSQYFGY EFLGDGTQFS LQVNDNKIIS FHGFADSHLN SVGAYFAPIS SSLTTTPNKV EAQGGNGGET FDDGVFDHVR KVYVGQGESG VAYVKFEYEK
201: DGKRETRDHG KMTLLGTEEF EVDSDDYITS IEVSVDKVFG YNSEIVTALV FKTSKGTTSP PFGMVTEKKF ELKDGNGGKL AGFHGKASDV LYALGAYFAP
301: STTSTTPSTT KKLQARGGNG GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DGHGKKTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV
401: VTSLMFKTNK RTSQPFGMTA GEHFELKEDG YKVVGFHGKA GDLVHQIGVH IVPIFTNYRV AI
101: NKHTSQYFGY EFLGDGTQFS LQVNDNKIIS FHGFADSHLN SVGAYFAPIS SSLTTTPNKV EAQGGNGGET FDDGVFDHVR KVYVGQGESG VAYVKFEYEK
201: DGKRETRDHG KMTLLGTEEF EVDSDDYITS IEVSVDKVFG YNSEIVTALV FKTSKGTTSP PFGMVTEKKF ELKDGNGGKL AGFHGKASDV LYALGAYFAP
301: STTSTTPSTT KKLQARGGNG GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DGHGKKTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV
401: VTSLMFKTNK RTSQPFGMTA GEHFELKEDG YKVVGFHGKA GDLVHQIGVH IVPIFTNYRV AI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.