Factsheet for AT2G25980.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G16430.2	Thale cress	cytosol	38.53	58.45
AT1G52100.1	Thale cress	cytosol	56.79	58.35
AT5G35940.1	Thale cress	cytosol	57.68	58.33
AT5G35950.1	Thale cress	cytosol	55.9	56.53
AT3G16420.1	Thale cress	cytosol	37.42	56.38
AT5G49860.1	Thale cress	cytosol, plastid	26.5	53.85
AT5G28520.1	Thale cress	cytosol	54.12	53.64
AT3G16450.2	Thale cress	cytosol	34.74	52.0
AT1G52060.1	Thale cress	extracellular	34.97	50.0
AT3G16440.2	Thale cress	cytosol	35.63	49.54
AT1G52070.1	Thale cress	extracellular	33.85	48.25
AT1G52050.1	Thale cress	extracellular	32.52	46.65
AT2G39310.4	Thale cress	cytosol	45.88	44.98
AT1G61230.1	Thale cress	cytosol	49.67	44.16
AT3G16470.1	Thale cress	cytosol	41.87	41.69
AT1G60095.1	Thale cress	cytosol	53.67	40.1
AT1G57570.1	Thale cress	mitochondrion	54.79	40.07
AT2G39330.2	Thale cress	cytosol	45.21	40.04
AT1G60130.1	Thale cress	cytosol	53.23	39.83
AT1G60110.2	Thale cress	cytosol	54.34	39.23
AT5G49850.1	Thale cress	cytosol	51.89	39.09
AT3G21380.1	Thale cress	cytosol	38.98	38.04
AT5G49870.1	Thale cress	cytosol	50.78	37.94
AT1G52120.2	Thale cress	cytosol	38.75	37.91
AT1G52110.1	Thale cress	mitochondrion	51.45	37.56
AT5G38550.1	Thale cress	cytosol	48.33	36.53
AT1G33790.2	Thale cress	cytosol	57.68	34.77
AT1G52130.1	Thale cress	cytosol	34.52	32.09
AT5G38540.1	Thale cress	cytosol	33.41	32.05
AT5G46000.1	Thale cress	cytosol	28.06	31.82
AT3G16460.1	Thale cress	cytosol	46.77	29.79
AT1G52030.2	Thale cress	cytosol	41.87	29.28
AT1G73040.1	Thale cress	cytosol	9.8	25.0
AT1G52040.1	Thale cress	cytosol	25.61	24.89
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	32.74	24.46
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	7.57	22.82
AT1G52000.2	Thale cress	cytosol	32.29	19.86

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EntrezGene:817139	ProteinID:AAC31237.1	ProteinID:AEC07779.1	ProteinID:ANM63060.1
ArrayExpress:AT2G25980	EnsemblPlantsGene:AT2G25980	RefSeq:AT2G25980	TAIR:AT2G25980	RefSeq:AT2G25980-TAIR-G	EnsemblPlants:AT2G25980.1
TAIR:AT2G25980.1	EMBL:AY078966	EMBL:AY133579	Unigene:At.38955	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0009506	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom
InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	RefSeq:NP_001325173.1	RefSeq:NP_180168.1	UniProt:O80998	PFAM:PF01419
PO:PO:0009005	PO:PO:0020100	PFscan:PS51752	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI0000001133	SEG:seg	:	:	:

Description

JAL20Jacalin-related lectin 20 [Source:UniProtKB/Swiss-Prot;Acc:O80998]

Coordinates

chr2:-:11077438..11079968

Molecular Weight (calculated)

48981.5 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.487

Length

449 amino acids

Sequence
(BLAST)

001: MAQRLEAKGG KGGNQWDDGA DHENVTKIHV RGGLEGIQFI KFEYVKAGQT VVGPIHGVSG KGFTQTFEIN HLNGEHVVSV KGCYDNISGV IQALQFETNQ
101: RSSEVMGYDD TGTKFTLEIS GNKITGFHGS ADANLKSLGA YFTPPPPIKQ EYQGGTGGSP WDHGIYTGIR KVYVTFSPVS ISHIKVDYDK DGKVETRQDG
201: DMLGENRVQG QPNEFVVDYP YEYITSIEVT CDKVSGNTNR VRSLSFKTSK DRTSPTYGRK SERTFVFESK GRALVGLHGR CCWAIDALGA HFGAPPIPPP
301: PPTEKLQGSG GDGGESWDDG AFDGVRKIYV GQGENGIASV KFVYDKNNQL VLGEEHGKHT LLGYEEFELD YPSEYITAVE GYYDKVFGSE SSVIVMLKFK
401: TNKRTSPPYG MDAGVSFILG KEGHKVVGFH GKASPELYQI GVTVAPITK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.