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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82963 Canola cytosol 57.07 53.94
CDY70857 Canola cytosol 56.57 53.46
Bra013637.1-P Field mustard cytosol 57.07 48.29
CDY68611 Canola cytosol 32.07 47.92
Bra013639.1-P Field mustard cytosol 54.29 44.7
CDX79175 Canola cytosol 32.58 42.43
AT3G16450.2 Thale cress cytosol 27.27 36.0
AT5G49860.1 Thale cress cytosol, plastid 18.43 33.03
AT3G16440.2 Thale cress cytosol 25.76 31.58
AT3G16470.1 Thale cress cytosol 35.1 30.82
AT1G52100.1 Thale cress cytosol 33.33 30.21
AT3G16430.2 Thale cress cytosol 21.46 28.72
AT5G35940.1 Thale cress cytosol 32.07 28.6
AT2G39310.4 Thale cress cytosol 32.83 28.38
AT5G35950.1 Thale cress cytosol 31.82 28.38
AT2G25980.1 Thale cress cytosol 31.82 28.06
AT3G16420.1 Thale cress cytosol 20.71 27.52
AT2G39330.2 Thale cress cytosol 35.1 27.42
AT5G28520.1 Thale cress cytosol 31.06 27.15
AT1G73040.1 Thale cress cytosol 11.87 26.7
AT1G52050.1 Thale cress extracellular 20.96 26.52
AT3G21380.1 Thale cress cytosol 29.55 25.43
AT1G52070.1 Thale cress extracellular 19.44 24.44
AT1G52060.1 Thale cress extracellular 18.94 23.89
AT1G52120.2 Thale cress cytosol 26.77 23.09
AT1G61230.1 Thale cress cytosol 28.54 22.38
AT1G60095.1 Thale cress cytosol 32.58 21.46
AT1G52030.2 Thale cress cytosol 33.84 20.87
AT1G60110.2 Thale cress cytosol 32.58 20.74
AT1G60130.1 Thale cress cytosol 31.31 20.67
AT1G57570.1 Thale cress mitochondrion 31.31 20.2
AT5G38550.1 Thale cress cytosol 29.8 19.87
AT5G49870.1 Thale cress cytosol 29.55 19.47
AT5G49850.1 Thale cress cytosol 28.28 18.79
AT1G52110.1 Thale cress mitochondrion 28.79 18.54
AT5G38540.1 Thale cress cytosol 21.72 18.38
AT1G52130.1 Thale cress cytosol 20.71 16.98
AT1G33790.2 Thale cress cytosol 31.82 16.91
AT3G16460.1 Thale cress cytosol 29.55 16.6
AT1G52040.1 Thale cress cytosol 18.18 15.58
AT1G19715.3 Thale cress cytoskeleton, cytosol, plastid 22.98 15.14
AT1G52000.2 Thale cress cytosol 22.73 12.33
GSMUA_Achr10P... Banana cytosol, nucleus, plastid 4.55 12.08
Protein Annotations
Gene3D:2.100.10.30MapMan:35.1EntrezGene:834640ProteinID:AED95325.1ArrayExpress:AT5G46000EnsemblPlantsGene:AT5G46000
RefSeq:AT5G46000TAIR:AT5G46000RefSeq:AT5G46000-TAIR-GEnsemblPlants:AT5G46000.1TAIR:AT5G46000.1Unigene:At.55397
ProteinID:BAB08245.1GO:GO:0003674GO:GO:0005488GO:GO:0030246InterPro:IPR001229InterPro:IPR036404
InterPro:Jacalin-like_lectin_domInterPro:Jacalin-like_lectin_dom_sfRefSeq:NP_199412.1PFAM:PF01419PFscan:PS51752PANTHER:PTHR23244
PANTHER:PTHR23244:SF208UniProt:Q9FNM2SMART:SM00915SUPFAM:SSF51101UniParc:UPI00000A5D33SEG:seg
Description
JAL45Jacalin-related lectin 45 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNM2]
Coordinates
chr5:-:18654196..18656376
Molecular Weight (calculated)
44177.0 Da
IEP (calculated)
8.929
GRAVY (calculated)
-0.543
Length
396 amino acids
Sequence
(BLAST)
001: MSKKVTIAYG GSNGNKFDDG VYEGTYDGVR KLIVGEDFHG IVYLKIQYVK NGDVVVKEHG RARGTHITET EFEVKCPDEY ITSIWGTCRN DHHRYKSTGG
101: RTFEQLTAAD KYDINLAAKM GTPMYWNTVS ELQFKTSHGR TSEQFRMPGT GGSNGVSWDD GAYDRLSKLC VGEDAHCVSS VEFHYVKGND RITHCHGKDS
201: KEHDKDGFIS SLTFKTSMNR SSEKFGKPVG TKFQLEAKGF DKIVGFRGRS SVNRINALGA NFAVVVVPPV KKLNAKGGVL GNEWDDGIHD DARMITFKLY
301: FNKEYITSVE GHYGKRLAAP NASASAMSSF FTGYMTMLKF NTNRTTYQVL SHSPEYTYEG TSFKLEEKDH KIVGFYGKTE VSLNQIGVYV KPIANA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.