Factsheet for AT5G49860.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G16450.2	Thale cress	cytosol	47.06	34.67
AT3G16440.2	Thale cress	cytosol	49.77	34.06
AT5G49870.1	Thale cress	cytosol	85.97	31.61
AT5G49850.1	Thale cress	cytosol	79.19	29.36
AT5G35950.1	Thale cress	cytosol	56.11	27.93
AT1G52110.1	Thale cress	mitochondrion	77.38	27.8
AT5G35940.1	Thale cress	cytosol	54.75	27.25
AT2G25980.1	Thale cress	cytosol	53.85	26.5
AT3G16430.2	Thale cress	cytosol	33.48	25.0
AT3G16420.1	Thale cress	cytosol	33.48	24.83
AT1G52100.1	Thale cress	cytosol	48.87	24.71
AT5G28520.1	Thale cress	cytosol	47.96	23.4
AT3G21380.1	Thale cress	cytosol	47.96	23.04
AT1G61230.1	Thale cress	cytosol	50.68	22.18
AT2G39310.4	Thale cress	cytosol	45.25	21.83
AT1G60095.1	Thale cress	cytosol	57.47	21.13
AT3G16470.1	Thale cress	cytosol	42.53	20.84
AT1G60130.1	Thale cress	cytosol	56.11	20.67
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	13.57	20.13
AT2G39330.2	Thale cress	cytosol	46.15	20.12
AT1G60110.2	Thale cress	cytosol	55.2	19.61
CDY69096	Canola	cytosol	51.13	19.32
CDY60590	Canola	cytosol	50.68	19.15
AT5G38550.1	Thale cress	cytosol	50.23	18.69
AT1G57570.1	Thale cress	mitochondrion	51.58	18.57
AT1G52060.1	Thale cress	extracellular	26.24	18.47
AT5G46000.1	Thale cress	cytosol	33.03	18.43
AT1G52070.1	Thale cress	extracellular	26.24	18.41
AT1G52050.1	Thale cress	extracellular	25.34	17.89
AT1G52120.2	Thale cress	cytosol	35.75	17.21
AT1G52040.1	Thale cress	cytosol	35.75	17.1
AT1G33790.2	Thale cress	cytosol	50.68	15.03
AT3G16460.1	Thale cress	cytosol	43.89	13.76
AT1G52030.2	Thale cress	cytosol	38.91	13.4
Bra018945.1-P	Field mustard	cytosol	31.67	13.28
AT5G38540.1	Thale cress	cytosol	20.81	9.83
AT1G52000.2	Thale cress	cytosol	32.13	9.73
AT1G73040.1	Thale cress	cytosol	7.69	9.66
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	26.24	9.65
AT1G52130.1	Thale cress	cytosol	20.36	9.32
CDY47824	Canola	cytosol	8.14	5.04
CDY34134	Canola	cytosol	1.36	1.44

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EntrezGene:835049	UniProt:A0A178U7Z5	ProteinID:AED95865.1	ArrayExpress:AT5G49860
EnsemblPlantsGene:AT5G49860	RefSeq:AT5G49860	TAIR:AT5G49860	RefSeq:AT5G49860-TAIR-G	EnsemblPlants:AT5G49860.1	TAIR:AT5G49860.1
Unigene:At.55462	ProteinID:BAA98153.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246	InterPro:IPR001229
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	RefSeq:NP_199797.1	ProteinID:OAO89943.1
PFAM:PF01419	PFscan:PS51752	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	UniProt:Q9LTA7	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI00000A7ED7	:	:	:	:

Description

JAL47Jacalin-related lectin 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA7]

Coordinates

chr5:-:20264567..20265334

Molecular Weight (calculated)

24306.6 Da

IEP (calculated)

5.272

GRAVY (calculated)

-0.304

Length

221 amino acids

Sequence
(BLAST)

001: MDSNVITSLT FKTSKGRTSP KFGYGTSDSV EFVLESKGCA IVGFYGWYKT GSGYTTALGA YYYPMPLPPS SEKLEAQGGA GGAPWDDGSN FEGVRKIYIG
101: TGEIGIVSIK FLYENDIHEI IVGDHHGNKN LLRHEEFDLD YPSEYLTSVE GSYDVVPGSE EDEVMIMLKF TTNMRTSPCY GLDDDPSFVL HKEGHKIVGF
201: HGKSSTMLHK LGIHVLPITH S

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.