Factsheet for AT1G52030.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G52040.1	Thale cress	cytosol	49.84	69.26
CDY46535	Canola	cytosol	35.05	58.44
CDY53442	Canola	cytosol	35.67	57.97
CDY32783	Canola	cytosol	45.48	55.83
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	48.44	55.24
CDY47758	Canola	cytosol	45.64	55.18
Bra014306.1-P	Field mustard	cytosol	34.89	54.63
Bra014308.1-P	Field mustard	cytosol	61.68	54.02
AT3G16450.2	Thale cress	cytosol	21.34	45.67
Bra014309.1-P	Field mustard	cytosol	59.03	44.38
AT2G39310.4	Thale cress	cytosol	31.31	43.89
CDY02564	Canola	cytosol	63.08	43.27
CDY51196	Canola	cytosol	62.15	42.9
AT2G25980.1	Thale cress	cytosol	29.28	41.87
AT3G16440.2	Thale cress	cytosol	20.72	41.18
CDY51197	Canola	cytosol	56.7	40.53
AT1G52100.1	Thale cress	cytosol	27.1	39.82
AT3G21380.1	Thale cress	cytosol	28.5	39.78
Bra014307.1-P	Field mustard	cytosol	53.89	39.54
AT5G35940.1	Thale cress	cytosol	27.1	39.19
AT2G39330.2	Thale cress	cytosol	30.84	39.05
AT5G49860.1	Thale cress	cytosol, plastid	13.4	38.91
AT3G16470.1	Thale cress	cytosol	27.1	38.58
AT5G35950.1	Thale cress	cytosol	26.17	37.84
AT3G16430.2	Thale cress	cytosol	16.98	36.82
CDY02563	Canola	cytosol, extracellular	59.81	36.23
CDY51195	Canola	cytosol, extracellular	59.97	36.18
AT3G16420.1	Thale cress	cytosol	16.51	35.57
AT5G28520.1	Thale cress	cytosol	24.77	35.1
Bra002818.1-P	Field mustard	cytosol	45.33	34.0
AT5G46000.1	Thale cress	cytosol	20.87	33.84
AT1G52120.2	Thale cress	cytosol	23.68	33.12
AT1G52060.1	Thale cress	extracellular	16.04	32.8
AT1G52050.1	Thale cress	extracellular	15.73	32.27
AT1G52070.1	Thale cress	extracellular	15.58	31.75
AT1G61230.1	Thale cress	cytosol	24.92	31.68
AT1G52000.2	Thale cress	cytosol	33.02	29.04
AT1G60095.1	Thale cress	cytosol	26.79	28.62
AT1G60110.2	Thale cress	cytosol	27.73	28.62
AT1G60130.1	Thale cress	cytosol	26.64	28.5
AT5G38550.1	Thale cress	cytosol	25.7	27.78
AT1G57570.1	Thale cress	mitochondrion	26.32	27.52
AT5G49850.1	Thale cress	cytosol	25.08	27.01
AT5G49870.1	Thale cress	cytosol	24.77	26.46
AT1G73040.1	Thale cress	cytosol	7.17	26.14
AT1G52110.1	Thale cress	mitochondrion	24.77	25.85
AT5G38540.1	Thale cress	cytosol	18.69	25.64
AT1G33790.2	Thale cress	cytosol	27.57	23.76
AT1G52130.1	Thale cress	cytosol	17.6	23.4
AT3G16460.1	Thale cress	cytosol	25.08	22.84
AT1G19715.3	Thale cress	cytoskeleton, cytosol, plastid	20.56	21.96
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	4.36	18.79

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EntrezGene:841632	ProteinID:AAD12677.1	EMBL:AB027252	ProteinID:AEE32747.1
ProteinID:AEE32748.1	EMBL:AK221159	ArrayExpress:AT1G52030	EnsemblPlantsGene:AT1G52030	RefSeq:AT1G52030	TAIR:AT1G52030
RefSeq:AT1G52030-TAIR-G	EnsemblPlants:AT1G52030.2	TAIR:AT1G52030.2	EMBL:AY039537	ProteinID:BAA84545.1	EMBL:BT002280
EMBL:D85194	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0006952	GO:GO:0007155
GO:GO:0007275	GO:GO:0008150	GO:GO:0009611	GO:GO:0009791	GO:GO:0009908	GO:GO:0010169
GO:GO:0010180	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant
InterPro:Jacalin-like_lectin_dom_sf	Symbol:MBP2	RefSeq:NP_175615.1	RefSeq:NP_849794.1	PFAM:PF01419	PO:PO:0000293
PO:PO:0001170	PO:PO:0009001	PO:PO:0009046	PFscan:PS51752	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208
UniProt:Q9SAV1	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0000000B8E	SEG:seg	:

Description

F-ATMBPMyrosinase-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV1]

Coordinates

chr1:-:19345940..19348951

Molecular Weight (calculated)

68853.0 Da

IEP (calculated)

6.771

GRAVY (calculated)

-0.329

Length

642 amino acids

Sequence
(BLAST)

001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.