Factsheet for Bra014306.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46535	Canola	cytosol	91.46	97.4
Bra017083.1-P	Field mustard	cytosol	32.2	36.16
AT1G52030.2	Thale cress	cytosol	54.63	34.89
Bra018941.1-P	Field mustard	cytosol	36.83	34.87
Bra018942.1-P	Field mustard	cytosol	31.46	33.95
Bra014308.1-P	Field mustard	cytosol	59.51	33.29
Bra021176.1-P	Field mustard	cytosol	37.8	33.19
Bra014307.1-P	Field mustard	cytosol	67.8	31.77
Bra005053.1-P	Field mustard	cytosol	31.95	28.67
Bra000129.1-P	Field mustard	cytosol	31.46	28.41
Bra014309.1-P	Field mustard	cytosol	59.02	28.34
Bra017082.1-P	Field mustard	cytosol	29.51	27.38
Bra017017.1-P	Field mustard	cytosol	22.68	27.19
Bra013637.1-P	Field mustard	cytosol	29.51	25.85
Bra002818.1-P	Field mustard	cytosol	52.44	25.12
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	11.22	24.6
Bra013639.1-P	Field mustard	cytosol	28.29	24.12
Bra008068.1-P	Field mustard	cytosol	10.24	23.86
Bra022161.1-P	Field mustard	cytosol	24.88	22.67
Bra021179.1-P	Field mustard	cytosol	23.41	21.24
Bra018945.1-P	Field mustard	cytosol	25.12	19.54
Bra023885.1-P	Field mustard	nucleus	24.15	18.33
Bra027095.1-P	Field mustard	cytosol	25.37	17.69
Bra001631.1-P	Field mustard	cytosol	12.44	17.17
Bra001632.1-P	Field mustard	cytosol	9.76	16.39
Bra021177.1-P	Field mustard	nucleus	11.71	16.11
Bra016496.1-P	Field mustard	cytosol	22.2	15.61
Bra025760.1-P	Field mustard	extracellular	22.68	15.32
Bra022160.1-P	Field mustard	cytosol	24.88	15.13
Bra030443.1-P	Field mustard	cytosol	26.83	14.82
Bra030402.1-P	Field mustard	cytosol	35.61	13.63
Bra026177.1-P	Field mustard	cytosol	9.02	12.63
Bra018940.1-P	Field mustard	cytosol	35.85	12.47
Bra014231.1-P	Field mustard	cytosol	23.66	9.26
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	2.2	6.04

Protein Annotations

EnsemblPlants:Bra014306.1	EnsemblPlants:Bra014306.1-P	EnsemblPlantsGene:Bra014306	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI0002545DC1	UniProt:M4DCT9	MapMan:35.1	:	:

Description

AT1G52030 (E=6e-089) MBP2, MBP1.2, F-ATMBP | MBP2 (MYROSINASE-BINDING PROTEIN 2); sugar binding / thioglucosidase binding

Coordinates

chrA08:+:1801727..1803053

Molecular Weight (calculated)

43534.0 Da

IEP (calculated)

9.936

GRAVY (calculated)

-0.195

Length

410 amino acids

Sequence
(BLAST)

001: MGTMSERMGA MGGTMGSPFD DGVFDGVRRI IVGRDWDCVS YIKIEYENSA GNFETREHGT NRGGIQEFTV DYPSEYITSV GGSFSRVFRY GTELIQSLIF
101: RTSRGRTSPI LGHSFLGFQL GTRFTLEGKN GGKLLGFHGR SGQALDAIGP YFFAANPPLR HFNPQGGNGG SAWDDGAFDG VRRILVGRGG SFVSFLRFEY
201: ARGQRTVPHD HGRRQEVPQE VLIVDIKYMC NCISLCLLRF ILVIIKIFWL KFVVDHPNEH ITVVEGTIDG FLTSLRFQTS IGRTSPAFGN VVGRRFVFQE
301: NNFKLVGFSG RSGDVIDALG ANFGPLPAPT PIPAPVPAPA PAPAPRPSPA PGPAGRWPPA PAPAPAPGPA PAPGPAPAPG PAPGQGPAPG RAPGPAPGRA
401: PGPAPGPAGR

Best Arabidopsis Sequence Match ( AT1G52030.1 )
(BLAST)

001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF

Arabidopsis Description

F-ATMBPMyrosinase-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.