Factsheet for Bra000129.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07657	Canola	cytosol	99.78	99.78
CDY24969	Canola	cytosol	96.26	96.26
Bra005053.1-P	Field mustard	cytosol	83.26	82.71
AT2G39310.4	Thale cress	cytosol	74.89	74.24
Bra017083.1-P	Field mustard	cytosol	59.25	73.7
Bra017082.1-P	Field mustard	cytosol	68.28	70.14
Bra017017.1-P	Field mustard	cytosol	40.97	54.39
Bra022161.1-P	Field mustard	cytosol	46.7	47.11
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	19.38	47.06
Bra001632.1-P	Field mustard	cytosol	24.89	46.31
Bra001631.1-P	Field mustard	cytosol	29.96	45.79
Bra021177.1-P	Field mustard	nucleus	29.96	45.64
Bra021176.1-P	Field mustard	cytosol	43.83	42.61
Bra021179.1-P	Field mustard	cytosol	40.75	40.93
Bra026177.1-P	Field mustard	cytosol	24.45	37.88
Bra018941.1-P	Field mustard	cytosol	36.12	37.88
Bra018942.1-P	Field mustard	cytosol	31.28	37.37
Bra013637.1-P	Field mustard	cytosol	35.9	34.83
Bra013639.1-P	Field mustard	cytosol	36.12	34.1
Bra023885.1-P	Field mustard	nucleus	39.65	33.33
Bra014306.1-P	Field mustard	cytosol	28.41	31.46
Bra027095.1-P	Field mustard	cytosol	40.09	30.95
Bra018945.1-P	Field mustard	cytosol	33.48	28.84
Bra022160.1-P	Field mustard	cytosol	42.73	28.78
Bra014308.1-P	Field mustard	cytosol	41.63	25.78
Bra030443.1-P	Field mustard	cytosol	42.07	25.74
Bra008068.1-P	Field mustard	cytosol	9.25	23.86
Bra014309.1-P	Field mustard	cytosol	41.19	21.9
Bra016496.1-P	Field mustard	cytosol	27.97	21.78
Bra025760.1-P	Field mustard	extracellular	28.41	21.25
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.83	20.81
Bra002818.1-P	Field mustard	cytosol	39.21	20.79
Bra014307.1-P	Field mustard	cytosol	36.56	18.97
Bra030402.1-P	Field mustard	cytosol	40.31	17.09
Bra018940.1-P	Field mustard	cytosol	41.41	15.95
Bra014231.1-P	Field mustard	cytosol	35.46	15.38

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	ProteinID:AAQ01567	ProteinID:AAQ01567.1	EMBL:AY337003	EnsemblPlantsGene:Bra000129
EnsemblPlants:Bra000129.1	EnsemblPlants:Bra000129.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246	InterPro:IPR001229
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	UniProt:M4C7F1	PFAM:PF01419
PFscan:PS51752	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI00025401E1

Description

AT2G39310 (E=7e-202) JAL22 | JAL22 (JACALIN-RELATED LECTIN 22)

Coordinates

chrA03:-:9451640..9453627

Molecular Weight (calculated)

49380.5 Da

IEP (calculated)

5.890

GRAVY (calculated)

-0.258

Length

454 amino acids

Sequence
(BLAST)

001: MSTVYRKLAI CGGEGGSEWD DDVYEGVRKV YVGQDLKRIT YIKFDYVKVD GQVVTREYGT KDQNPKEFIV AQHPDEQIIA VEGSYNKVGL LGTDVITSLV
101: FKTSKGRKSP TFGPNLLGLV NGTKFEFEDP GKKIVGFHGR AGDALDAIGV YFVINSLPPS LSPIYKLDAQ GGAEGRVWND GSFDAVKRLR IGQDNVRITY
201: LEFEYAKGGK SEQLHHGVKG GTPSEFVLDF PDEYIKSVEA TYDKPNLFQN TVITSLTIKT SKGRTSSFGY TKGKKFVLEQ KDCPLVGFHG KVGDAIDALG
301: AYFAPLVPAK KLPSVGGNGG VAWDDGVYDG VRKIYVGQGN DGVSFVKFEY TKGTELVSGD EHGKATILGA EEFVLEDGEY LTALVGYYDK IYGVDEPAII
401: SLQFKTNKRE SIPFGMSAGE KFTLGESGHK IVGFHGQASD VIHSVGVTIV SITE

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.