Factsheet for Bra001632.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82401	Canola	cytosol	100.0	91.73
Bra021177.1-P	Field mustard	nucleus	86.48	70.81
CDX75882	Canola	cytosol	79.1	67.48
Bra001631.1-P	Field mustard	cytosol	76.23	62.63
Bra021179.1-P	Field mustard	cytosol	71.72	38.72
Bra026177.1-P	Field mustard	cytosol	42.21	35.15
Bra021178.1-P	Field mustard	cytosol, nucleus, plastid	19.26	25.13
Bra000129.1-P	Field mustard	cytosol	46.31	24.89
Bra005053.1-P	Field mustard	cytosol	45.9	24.51
Bra022161.1-P	Field mustard	cytosol	45.08	24.44
Bra021176.1-P	Field mustard	cytosol	43.03	22.48
Bra022160.1-P	Field mustard	cytosol	61.07	22.11
Bra017082.1-P	Field mustard	cytosol	39.34	21.72
Bra018942.1-P	Field mustard	cytosol	32.38	20.79
Bra027095.1-P	Field mustard	cytosol	50.0	20.75
Bra023885.1-P	Field mustard	nucleus	44.26	20.0
Bra018941.1-P	Field mustard	cytosol	34.43	19.4
Bra017017.1-P	Field mustard	cytosol	26.23	18.71
Bra030443.1-P	Field mustard	cytosol	52.87	17.39
Bra013637.1-P	Field mustard	cytosol	32.79	17.09
Bra013639.1-P	Field mustard	cytosol	32.79	16.63
Bra017083.1-P	Field mustard	cytosol	24.59	16.44
Bra018945.1-P	Field mustard	cytosol	29.51	13.66
Bra016496.1-P	Field mustard	cytosol	31.56	13.21
Bra014308.1-P	Field mustard	cytosol	38.11	12.69
Bra008068.1-P	Field mustard	cytosol	8.61	11.93
Bra025760.1-P	Field mustard	extracellular	29.51	11.86
Bra014309.1-P	Field mustard	cytosol	38.93	11.12
Bra014231.1-P	Field mustard	cytosol	47.54	11.08
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.56	10.74
Bra014306.1-P	Field mustard	cytosol	16.39	9.76
Bra002818.1-P	Field mustard	cytosol	34.02	9.7
Bra030402.1-P	Field mustard	cytosol	33.61	7.66
Bra014307.1-P	Field mustard	cytosol	26.64	7.43
Bra018940.1-P	Field mustard	cytosol	32.79	6.79

Protein Annotations

EnsemblPlants:Bra001632.1	EnsemblPlants:Bra001632.1-P	EnsemblPlantsGene:Bra001632	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	SEG:seg	SMART:SM00915
SUPFAM:SSF51101	UniParc:UPI0002540AC6	UniProt:M4CBQ2	MapMan:35.1	:	:

Description

AT3G16450 (E=3e-048) | jacalin lectin family protein

Coordinates

chrA03:+:17565296..17566601

Molecular Weight (calculated)

26621.3 Da

IEP (calculated)

6.072

GRAVY (calculated)

-0.365

Length

244 amino acids

Sequence
(BLAST)

001: MAQKVEAQGG KGGNQWDDGS EHDAVIKIQF VISHPEEHLV SVEGWYNPEG LLQGLKFKSN KKTSDLIGYD DGTHFTLQVQ DKKIVGFHGF AGDYVHSLGA
101: YFSPLTSSTT LTPAKKLPAL GQGHDGVSAV KFEYVNGSQV VIGHERGKPT LLGFEEFELD YPNEYITAVD GTVDKIYGSD SAVITMLRFT TNKRTSNPFG
201: LEAGAAFQLK EEGHKIVGFH GKANELLHQI GAHLLLDTSP QAQY

Best Arabidopsis Sequence Match ( AT3G16430.2 )
(BLAST)

001: MAQKVEAKGG KGGNQWDDGS DHDAVTKIQV AVGGMGIQYI QFDYVKNGQT EQTPLRGIKG STIPTDPFVI NHPEEHLVSI EIWYKPDGLI QGLRFISNKK
101: TSRFIGYDRG TRSFLQVQDK KIIGFHGSAG DNLNSLGAYF APLTIPLTPA KPLPALGSDD GTAWDDGAYV GVKKVYVGQA QDGISAVKFV YDKSPEEVTG
201: EEHGKSTLLG FEEFVLDYPS EYIIAVEGTY DKIFGSDGSV ITMLRFKTNK QTSPPFGLEA GTAFELKEEG HKIVGFHGRA DALLHKIGVH VRPVSN

Arabidopsis Description

PBP2PYK10-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O04313]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.