Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001632.1-P | Field mustard | cytosol | 91.73 | 100.0 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 61.65 | 75.58 |
| CDX75882 | Canola | cytosol | 80.83 | 75.17 |
| CDX82402 | Canola | cytosol, plasma membrane | 77.07 | 69.02 |
| CDY54394 | Canola | cytosol | 20.68 | 55.0 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 42.11 | 53.59 |
| CDY53520 | Canola | cytosol | 40.6 | 36.86 |
| CDY45301 | Canola | cytosol | 40.23 | 36.52 |
| CDY28360 | Canola | cytosol | 21.43 | 33.53 |
| CDX77840 | Canola | cytosol | 11.65 | 32.63 |
| CDY21999 | Canola | extracellular | 20.68 | 31.79 |
| CDY06998 | Canola | cytosol | 24.81 | 31.73 |
| CDY13177 | Canola | extracellular | 36.09 | 30.38 |
| CDX90860 | Canola | cytosol | 43.61 | 30.05 |
| CDX93274 | Canola | cytosol | 25.19 | 29.78 |
| CDY02548 | Canola | cytosol | 44.74 | 27.36 |
| CDY20197 | Canola | cytosol | 20.3 | 26.21 |
| CDY07657 | Canola | cytosol | 43.61 | 25.55 |
| CDY24969 | Canola | cytosol | 43.23 | 25.33 |
| CDY20195 | Canola | cytosol | 40.23 | 25.24 |
| CDY59556 | Canola | cytosol | 41.73 | 24.83 |
| CDX74856 | Canola | cytosol | 42.86 | 24.78 |
| CDX92074 | Canola | cytosol | 58.27 | 23.85 |
| CDY43099 | Canola | cytosol | 57.52 | 22.6 |
| CDY07000 | Canola | cytosol | 36.84 | 22.17 |
| CDX93273 | Canola | cytosol | 37.59 | 21.93 |
| CDY38589 | Canola | cytosol | 37.59 | 21.83 |
| CDY40959 | Canola | cytosol | 41.73 | 21.76 |
| CDY06997 | Canola | cytosol | 35.34 | 20.98 |
| CDY43090 | Canola | cytosol | 21.43 | 20.58 |
| CDY22879 | Canola | cytosol | 33.08 | 20.32 |
| CDX93275 | Canola | cytosol | 33.46 | 19.87 |
| CDY69096 | Canola | cytosol | 42.86 | 19.49 |
| CDY60590 | Canola | cytosol | 42.86 | 19.49 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 25.19 | 18.56 |
| CDY43910 | Canola | cytosol | 51.13 | 18.33 |
| CDX82963 | Canola | cytosol | 27.44 | 17.42 |
| CDY70857 | Canola | cytosol | 27.44 | 17.42 |
| CDY32783 | Canola | cytosol | 33.46 | 17.02 |
| CDY47758 | Canola | cytosol | 33.83 | 16.95 |
| CDX79175 | Canola | cytosol | 18.8 | 16.45 |
| CDY59365 | Canola | cytosol | 44.36 | 14.79 |
| CDY06999 | Canola | cytosol | 17.29 | 14.47 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 30.08 | 14.21 |
| CDY68611 | Canola | cytosol | 13.91 | 13.96 |
| CDY63700 | Canola | cytosol | 30.45 | 13.85 |
| CDY72239 | Canola | cytosol | 15.79 | 13.5 |
| CDX96652 | Canola | extracellular | 30.83 | 13.33 |
| CDY45640 | Canola | cytosol | 14.29 | 12.38 |
| CDY46535 | Canola | cytosol | 16.54 | 11.43 |
| CDY65744 | Canola | peroxisome | 12.03 | 11.27 |
| CDY53442 | Canola | cytosol | 16.54 | 11.14 |
| CDY47824 | Canola | cytosol | 14.66 | 10.92 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 6.02 | 10.74 |
| CDY51197 | Canola | cytosol | 35.71 | 10.58 |
| CDY51196 | Canola | cytosol | 36.84 | 10.54 |
| CDY02564 | Canola | cytosol | 36.47 | 10.36 |
| CDY70821 | Canola | cytosol | 17.29 | 10.27 |
| CDX82115 | Canola | extracellular | 9.4 | 10.0 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 8.65 | 10.0 |
| CDX87871 | Canola | cytosol | 31.95 | 9.25 |
| CDY51195 | Canola | cytosol, extracellular | 36.09 | 9.02 |
| CDY02563 | Canola | cytosol, extracellular | 35.34 | 8.87 |
| CDY22878 | Canola | cytosol | 31.58 | 8.55 |
| CDY34134 | Canola | cytosol | 4.89 | 6.25 |
| CDY47825 | Canola | cytosol | 16.92 | 5.67 |
Protein Annotations
| EnsemblPlants:CDX82401 | EnsemblPlantsGene:GSBRNA2T00137524001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDX82401 | ProteinID:CDX82401.1 | SEG:seg |
| SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0004EE76F3 | MapMan:35.1 | : | : |
Description
BnaA03g34200D
Coordinates
chrLK031828:-:1020209..1021629
Molecular Weight (calculated)
28870.9 Da
IEP (calculated)
6.077
GRAVY (calculated)
-0.406
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKVEAQGG KGGNQWDDGS EHDAVIKIQN GQTEEAPLRG IKGRSIAADP FVISHPEEHL VSVEGWYNPE GLLQGLKFKS NKKTSDLIGY DDGTHFTLQV
101: QDKKIVGFHG FAGDYVHSLG AYFSPLTSST TLTPAKKLPA LGSQGHDGVS AVKFEYVNGS QVVIGHERGK PTLLGFEEFE LDYPNEYITA VDGTVDKIYG
201: SDSAVITMLR FTTNKRTSNP FGLEAGAAFQ LKEEGHKIVG FHGKANELLH QIGAHLLLDT SPQAQY
101: QDKKIVGFHG FAGDYVHSLG AYFSPLTSST TLTPAKKLPA LGSQGHDGVS AVKFEYVNGS QVVIGHERGK PTLLGFEEFE LDYPNEYITA VDGTVDKIYG
201: SDSAVITMLR FTTNKRTSNP FGLEAGAAFQ LKEEGHKIVG FHGKANELLH QIGAHLLLDT SPQAQY
001: MAQKVEAKGG KGGNQWDDGS DHDAVTKIQV AVGGMGIQYI QFDYVKNGQT EQTPLRGIKG STIPTDPFVI NHPEEHLVSI EIWYKPDGLI QGLRFISNKK
101: TSRFIGYDRG TRSFLQVQDK KIIGFHGSAG DNLNSLGAYF APLTIPLTPA KPLPALGSDD GTAWDDGAYV GVKKVYVGQA QDGISAVKFV YDKSPEEVTG
201: EEHGKSTLLG FEEFVLDYPS EYIIAVEGTY DKIFGSDGSV ITMLRFKTNK QTSPPFGLEA GTAFELKEEG HKIVGFHGRA DALLHKIGVH VRPVSN
101: TSRFIGYDRG TRSFLQVQDK KIIGFHGSAG DNLNSLGAYF APLTIPLTPA KPLPALGSDD GTAWDDGAYV GVKKVYVGQA QDGISAVKFV YDKSPEEVTG
201: EEHGKSTLLG FEEFVLDYPS EYIIAVEGTY DKIFGSDGSV ITMLRFKTNK QTSPPFGLEA GTAFELKEEG HKIVGFHGRA DALLHKIGVH VRPVSN
Arabidopsis Description
PBP2PYK10-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O04313]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.