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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82402 Canola cytosol, plasma membrane 39.56 42.09
CDY54394 Canola cytosol 12.66 40.0
CDY28362 Canola cytosol, nucleus, plastid 25.63 37.33
CDX77840 Canola cytosol 11.08 36.84
CDX82401 Canola cytosol 30.38 36.09
CDX75881 Canola cytosol, extracellular, mitochondrion, plastid 21.52 32.54
CDX75882 Canola cytosol 28.8 31.82
CDY53520 Canola cytosol 28.16 30.38
CDY45301 Canola cytosol 27.85 30.03
CDY21999 Canola extracellular 15.51 28.32
CDY02548 Canola cytosol 37.97 27.59
CDX90860 Canola cytosol 33.23 27.2
CDY28360 Canola cytosol 14.56 27.06
CDY20197 Canola cytosol 16.77 25.73
CDY06998 Canola cytosol 16.46 25.0
CDY40959 Canola cytosol 40.19 24.9
CDX93274 Canola cytosol 17.72 24.89
CDX74856 Canola cytosol 36.08 24.78
CDY20195 Canola cytosol 33.23 24.76
CDY24969 Canola cytosol 34.18 23.79
CDY60590 Canola cytosol 43.99 23.76
CDY69096 Canola cytosol 43.67 23.59
CDY07657 Canola cytosol 33.86 23.57
CDX93273 Canola cytosol 33.86 23.46
CDY06997 Canola cytosol 33.23 23.44
CDY22879 Canola cytosol 31.96 23.33
CDY07000 Canola cytosol 32.59 23.3
CDY38589 Canola cytosol 33.23 22.93
CDX93275 Canola cytosol 32.28 22.77
CDY43090 Canola cytosol 18.67 21.3
CDY59556 Canola cytosol 28.8 20.36
CDY06999 Canola cytosol 19.94 19.81
GSMUA_Achr10P... Banana cytosol, nucleus, plastid 9.18 19.46
CDY43910 Canola cytosol 44.62 19.0
CDY32783 Canola cytosol 31.33 18.93
CDX92074 Canola cytosol 38.92 18.92
CDY65744 Canola peroxisome 16.77 18.66
CDY47758 Canola cytosol 31.01 18.46
CDY70857 Canola cytosol 23.73 17.9
CDY43099 Canola cytosol 37.97 17.73
CDY47824 Canola cytosol 19.94 17.65
CDX82963 Canola cytosol 23.1 17.42
CDY02565 Canola cytoskeleton, cytosol, plasma membrane 30.06 16.87
CDY72239 Canola cytosol 16.14 16.4
CDY45640 Canola cytosol 15.82 16.29
CDY44637 Canola cytosol, mitochondrion, plastid 18.04 15.79
CDX79175 Canola cytosol 15.19 15.79
CDY63700 Canola cytosol 29.11 15.73
CDX96652 Canola extracellular 29.43 15.12
CDY68611 Canola cytosol 11.71 13.96
CDY59365 Canola cytosol 34.49 13.66
CDY46535 Canola cytosol 14.87 12.21
CDY48032 Canola cytosol, extracellular, nucleus 8.86 12.17
CDY53442 Canola cytosol 15.19 12.15
CDY51197 Canola cytosol 33.23 11.69
CDX82115 Canola extracellular 9.18 11.6
CDY70821 Canola cytosol 16.14 11.38
CDY02564 Canola cytosol 33.54 11.32
CDY51196 Canola cytosol 33.23 11.29
CDX87871 Canola cytosol 31.01 10.66
CDY02563 Canola cytosol, extracellular 34.18 10.19
CDY22878 Canola cytosol 31.33 10.08
CDY51195 Canola cytosol, extracellular 33.23 9.87
CDY34134 Canola cytosol 6.33 9.62
CDY47825 Canola cytosol 16.46 6.56
Protein Annotations
EnsemblPlants:CDY13177EnsemblPlantsGene:GSBRNA2T00071047001Gene3D:2.100.10.30GO:GO:0003674GO:GO:0005488GO:GO:0030246
InterPro:IPR001229InterPro:IPR036404InterPro:Jacalin-like_lectin_domInterPro:Jacalin-like_lectin_dom_plantInterPro:Jacalin-like_lectin_dom_sfPFAM:PF01419
PFscan:PS51752ProteinID:CDY13177ProteinID:CDY13177.1SignalP:SignalP-noTMSMART:SM00915SUPFAM:SSF51101
UniParc:UPI0004EE2FC0UniProt:A0A078FJK1MapMan:35.1:::
Description
BnaC04g26580DBnaC04g26580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJK1]
Coordinates
chrLK032032:-:208325..210780
Molecular Weight (calculated)
34833.1 Da
IEP (calculated)
5.365
GRAVY (calculated)
-0.204
Length
316 amino acids
Sequence
(BLAST)
001: MFIIYICFFL TSAIIDSNGL AMAQKLEPIG GKGGKQWDDG IDHDYVTKVY IRGGREGIHY IKFDYVKDGQ SIDGLIHGVS GDGFTHTLEI DQSNYEHIVS
101: VDGYYDDKTG VMQALQFKTN LKTFDLIGYP KGTSKFSLGF DGKIIIGFYG FSGRFLNSLG AYLRKTPPTK SGLVGGLYGG EYWDDGPNYD GVRKVYVTYT
201: NYLIRSISTD YDKDGQVVTS SHGSKNGETK EFVIDYPNEY LTSVEGTYNT IPEDGVLVVR SLIFKTSKGR ISPTYGFVSG TQFVLESQGN VIVGFYGRDG
301: GGFDAIGVYF SPIITP
Best Arabidopsis Sequence Match ( AT1G52070.1 )
(BLAST)
001: MVIIYIFLFL SSAIIDSTGL AKAQKLDAIG GKGGKQWDDG ADHDNVAKVY IRGGLEGIQY IKFDYVKDGK TIDASIHGVS GSGFTQTFEI DYQNSEYIVS
101: VDGYYDKSGT MQALEFKTNL KTSEVIGYPK GTTKFSLGGV NGKMVIGFHG SAGKVLNSIG AYLTTAPPTK SQLVGGLTGG EPWDDGSNYD GVKKISVTYI
201: STLIRSINVD YEKDGQVVTR YHGMKNGDTE EFVIDYPNEY LISVEGTYNI LPDDNVLVIR SLIFKTSKGR ISPTYGFVSG TKFVLESQGN AIVGFYGRDG
301: GAFDAIGVYF SPIPS
Arabidopsis Description
JAL10Jacalin-related lectin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWI7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.