Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX82402 | Canola | cytosol, plasma membrane | 39.56 | 42.09 |
CDY54394 | Canola | cytosol | 12.66 | 40.0 |
CDY28362 | Canola | cytosol, nucleus, plastid | 25.63 | 37.33 |
CDX77840 | Canola | cytosol | 11.08 | 36.84 |
CDX82401 | Canola | cytosol | 30.38 | 36.09 |
CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 21.52 | 32.54 |
CDX75882 | Canola | cytosol | 28.8 | 31.82 |
CDY53520 | Canola | cytosol | 28.16 | 30.38 |
CDY45301 | Canola | cytosol | 27.85 | 30.03 |
CDY21999 | Canola | extracellular | 15.51 | 28.32 |
CDY02548 | Canola | cytosol | 37.97 | 27.59 |
CDX90860 | Canola | cytosol | 33.23 | 27.2 |
CDY28360 | Canola | cytosol | 14.56 | 27.06 |
CDY20197 | Canola | cytosol | 16.77 | 25.73 |
CDY06998 | Canola | cytosol | 16.46 | 25.0 |
CDY40959 | Canola | cytosol | 40.19 | 24.9 |
CDX93274 | Canola | cytosol | 17.72 | 24.89 |
CDX74856 | Canola | cytosol | 36.08 | 24.78 |
CDY20195 | Canola | cytosol | 33.23 | 24.76 |
CDY24969 | Canola | cytosol | 34.18 | 23.79 |
CDY60590 | Canola | cytosol | 43.99 | 23.76 |
CDY69096 | Canola | cytosol | 43.67 | 23.59 |
CDY07657 | Canola | cytosol | 33.86 | 23.57 |
CDX93273 | Canola | cytosol | 33.86 | 23.46 |
CDY06997 | Canola | cytosol | 33.23 | 23.44 |
CDY22879 | Canola | cytosol | 31.96 | 23.33 |
CDY07000 | Canola | cytosol | 32.59 | 23.3 |
CDY38589 | Canola | cytosol | 33.23 | 22.93 |
CDX93275 | Canola | cytosol | 32.28 | 22.77 |
CDY43090 | Canola | cytosol | 18.67 | 21.3 |
CDY59556 | Canola | cytosol | 28.8 | 20.36 |
CDY06999 | Canola | cytosol | 19.94 | 19.81 |
GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 9.18 | 19.46 |
CDY43910 | Canola | cytosol | 44.62 | 19.0 |
CDY32783 | Canola | cytosol | 31.33 | 18.93 |
CDX92074 | Canola | cytosol | 38.92 | 18.92 |
CDY65744 | Canola | peroxisome | 16.77 | 18.66 |
CDY47758 | Canola | cytosol | 31.01 | 18.46 |
CDY70857 | Canola | cytosol | 23.73 | 17.9 |
CDY43099 | Canola | cytosol | 37.97 | 17.73 |
CDY47824 | Canola | cytosol | 19.94 | 17.65 |
CDX82963 | Canola | cytosol | 23.1 | 17.42 |
CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 30.06 | 16.87 |
CDY72239 | Canola | cytosol | 16.14 | 16.4 |
CDY45640 | Canola | cytosol | 15.82 | 16.29 |
CDY44637 | Canola | cytosol, mitochondrion, plastid | 18.04 | 15.79 |
CDX79175 | Canola | cytosol | 15.19 | 15.79 |
CDY63700 | Canola | cytosol | 29.11 | 15.73 |
CDX96652 | Canola | extracellular | 29.43 | 15.12 |
CDY68611 | Canola | cytosol | 11.71 | 13.96 |
CDY59365 | Canola | cytosol | 34.49 | 13.66 |
CDY46535 | Canola | cytosol | 14.87 | 12.21 |
CDY48032 | Canola | cytosol, extracellular, nucleus | 8.86 | 12.17 |
CDY53442 | Canola | cytosol | 15.19 | 12.15 |
CDY51197 | Canola | cytosol | 33.23 | 11.69 |
CDX82115 | Canola | extracellular | 9.18 | 11.6 |
CDY70821 | Canola | cytosol | 16.14 | 11.38 |
CDY02564 | Canola | cytosol | 33.54 | 11.32 |
CDY51196 | Canola | cytosol | 33.23 | 11.29 |
CDX87871 | Canola | cytosol | 31.01 | 10.66 |
CDY02563 | Canola | cytosol, extracellular | 34.18 | 10.19 |
CDY22878 | Canola | cytosol | 31.33 | 10.08 |
CDY51195 | Canola | cytosol, extracellular | 33.23 | 9.87 |
CDY34134 | Canola | cytosol | 6.33 | 9.62 |
CDY47825 | Canola | cytosol | 16.46 | 6.56 |
Protein Annotations
EnsemblPlants:CDY13177 | EnsemblPlantsGene:GSBRNA2T00071047001 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
PFscan:PS51752 | ProteinID:CDY13177 | ProteinID:CDY13177.1 | SignalP:SignalP-noTM | SMART:SM00915 | SUPFAM:SSF51101 |
UniParc:UPI0004EE2FC0 | UniProt:A0A078FJK1 | MapMan:35.1 | : | : | : |
Description
BnaC04g26580DBnaC04g26580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJK1]
Coordinates
chrLK032032:-:208325..210780
Molecular Weight (calculated)
34833.1 Da
IEP (calculated)
5.365
GRAVY (calculated)
-0.204
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MFIIYICFFL TSAIIDSNGL AMAQKLEPIG GKGGKQWDDG IDHDYVTKVY IRGGREGIHY IKFDYVKDGQ SIDGLIHGVS GDGFTHTLEI DQSNYEHIVS
101: VDGYYDDKTG VMQALQFKTN LKTFDLIGYP KGTSKFSLGF DGKIIIGFYG FSGRFLNSLG AYLRKTPPTK SGLVGGLYGG EYWDDGPNYD GVRKVYVTYT
201: NYLIRSISTD YDKDGQVVTS SHGSKNGETK EFVIDYPNEY LTSVEGTYNT IPEDGVLVVR SLIFKTSKGR ISPTYGFVSG TQFVLESQGN VIVGFYGRDG
301: GGFDAIGVYF SPIITP
101: VDGYYDDKTG VMQALQFKTN LKTFDLIGYP KGTSKFSLGF DGKIIIGFYG FSGRFLNSLG AYLRKTPPTK SGLVGGLYGG EYWDDGPNYD GVRKVYVTYT
201: NYLIRSISTD YDKDGQVVTS SHGSKNGETK EFVIDYPNEY LTSVEGTYNT IPEDGVLVVR SLIFKTSKGR ISPTYGFVSG TQFVLESQGN VIVGFYGRDG
301: GGFDAIGVYF SPIITP
001: MVIIYIFLFL SSAIIDSTGL AKAQKLDAIG GKGGKQWDDG ADHDNVAKVY IRGGLEGIQY IKFDYVKDGK TIDASIHGVS GSGFTQTFEI DYQNSEYIVS
101: VDGYYDKSGT MQALEFKTNL KTSEVIGYPK GTTKFSLGGV NGKMVIGFHG SAGKVLNSIG AYLTTAPPTK SQLVGGLTGG EPWDDGSNYD GVKKISVTYI
201: STLIRSINVD YEKDGQVVTR YHGMKNGDTE EFVIDYPNEY LISVEGTYNI LPDDNVLVIR SLIFKTSKGR ISPTYGFVSG TKFVLESQGN AIVGFYGRDG
301: GAFDAIGVYF SPIPS
101: VDGYYDKSGT MQALEFKTNL KTSEVIGYPK GTTKFSLGGV NGKMVIGFHG SAGKVLNSIG AYLTTAPPTK SQLVGGLTGG EPWDDGSNYD GVKKISVTYI
201: STLIRSINVD YEKDGQVVTR YHGMKNGDTE EFVIDYPNEY LISVEGTYNI LPDDNVLVIR SLIFKTSKGR ISPTYGFVSG TKFVLESQGN AIVGFYGRDG
301: GAFDAIGVYF SPIPS
Arabidopsis Description
JAL10Jacalin-related lectin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWI7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.