CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017082.1-P	Field mustard	cytosol	99.32	99.32
CDX93273	Canola	cytosol	94.12	91.23
CDY06999	Canola	cytosol	59.05	82.08
CDX74856	Canola	cytosol	73.53	70.65
CDY24969	Canola	cytosol	70.81	68.94
CDY07657	Canola	cytosol	70.36	68.5
AT2G39310.4	Thale cress	cytosol	69.23	66.81
CDY06997	Canola	cytosol	67.65	66.74
CDX93274	Canola	cytosol	33.71	66.22
CDX93275	Canola	cytosol	66.29	65.4
CDY06998	Canola	cytosol	28.73	61.06
CDY44637	Canola	cytosol, mitochondrion, plastid	49.77	60.94
CDY38589	Canola	cytosol	62.44	60.26
CDY20197	Canola	cytosol	20.14	43.2
CDX90860	Canola	cytosol	35.29	40.41
CDY20195	Canola	cytosol	38.24	39.86
CDX82402	Canola	cytosol, plasma membrane	26.7	39.73
CDY28362	Canola	cytosol, nucleus, plastid	19.0	38.71
CDY21999	Canola	extracellular	14.93	38.15
CDY54394	Canola	cytosol	8.6	38.0
CDY02548	Canola	cytosol	36.88	37.47
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	17.65	37.32
CDX82401	Canola	cytosol	22.17	36.84
CDY65744	Canola	peroxisome	22.85	35.56
CDY59556	Canola	cytosol	35.29	34.9
CDX77840	Canola	cytosol	7.47	34.74
CDX79175	Canola	cytosol	23.53	34.21
CDY70857	Canola	cytosol	32.13	33.89
CDX82963	Canola	cytosol	31.9	33.65
CDY13177	Canola	extracellular	23.3	32.59
CDY45640	Canola	cytosol	22.4	32.25
CDY53520	Canola	cytosol	21.27	32.08
CDY68611	Canola	cytosol	19.23	32.08
CDY22879	Canola	cytosol	31.22	31.87
CDY45301	Canola	cytosol	21.04	31.74
CDY46535	Canola	cytosol	26.92	30.91
CDY32783	Canola	cytosol	36.43	30.78
CDX75882	Canola	cytosol	19.91	30.77
CDY53442	Canola	cytosol	27.15	30.38
CDY47758	Canola	cytosol	36.43	30.32
CDY28360	Canola	cytosol	11.54	30.0
CDY69096	Canola	cytosol	37.78	28.55
CDY60590	Canola	cytosol	37.56	28.38
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	34.16	26.82
CDY72239	Canola	cytosol	18.55	26.37
CDX92074	Canola	cytosol	38.69	26.31
CDY40959	Canola	cytosol	29.86	25.88
CDY43099	Canola	cytosol	38.91	25.41
CDY43910	Canola	cytosol	39.59	23.58
CDY70821	Canola	cytosol	23.53	23.21
CDY63700	Canola	cytosol	27.38	20.68
CDX96652	Canola	extracellular	27.38	19.67
CDY59365	Canola	cytosol	35.29	19.55
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.56	19.46
CDY02564	Canola	cytosol	39.37	18.59
CDY51196	Canola	cytosol	38.69	18.39
CDY48032	Canola	cytosol, extracellular, nucleus	9.5	18.26
CDY51197	Canola	cytosol	36.65	18.04
CDY22878	Canola	cytosol	39.82	17.92
CDX87871	Canola	cytosol	35.97	17.3
CDX82115	Canola	extracellular	9.28	16.4
CDY02563	Canola	cytosol, extracellular	38.91	16.23
CDY51195	Canola	cytosol, extracellular	38.46	15.98
CDY47825	Canola	cytosol	26.7	14.88
CDY43090	Canola	cytosol	9.05	14.44
CDY47824	Canola	cytosol	10.63	13.17
CDY34134	Canola	cytosol	2.49	5.29

Protein Annotations

EnsemblPlants:CDY07000	EnsemblPlantsGene:GSBRNA2T00123312001	Gene3D:2.100.10.30	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY07000	ProteinID:CDY07000.1	SEG:seg
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EDDDE8	MapMan:35.1	:	:

Description

BnaA04g23150D

Coordinates

chrLK031974:-:614738..617701

Molecular Weight (calculated)

49177.7 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.396

Length

442 amino acids

Sequence
(BLAST)

001: MYQKLALRGG EGGREWDDDV YEGVKKVYVG QDFSRITYIK FEYVKEDGEV VTREYGTITQ DPREFIIEYP GEHITAVEGS YNKVALIATE GRTSPTFGPN
101: LFGVVNGTKF KFEDEGKKIV GFHGRSDNAI DALGVYLVLD SLTTPFPLYK LDAQGGTEGR VWDDGSFDGV RTVRVCQDDH RITYLEFEYD KGGKSEKLHH
201: GVKGGTSSEL LLDYPNEYVK SVEVTYDKPK LFQNTVITSF TFETSSERTS FIGYKVGKKF VLEQKDLRLV GFHGKEGDAI DALGAYFAPI QAPTPLIPTK
301: KLPLVGGNGG VKWDDGAFDG VRKISIGQCY DVVSYVKFDY IKGTELVSGD EHGQTLPEAS ELVLEDDEYL LSLGGYYDKS RGAIRYIDIV NTNKRDSPDY
401: ELNYGEKFTL GESGHKIVGF YGQASDVLHS IGVYVVPITS VE

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.