CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07000	Canola	cytosol	91.23	94.12
CDY06999	Canola	cytosol	60.75	87.11
CDX74856	Canola	cytosol	75.66	75.0
CDY24969	Canola	cytosol	72.59	72.91
CDY07657	Canola	cytosol	72.37	72.69
AT2G39310.4	Thale cress	cytosol	71.49	71.18
CDY06997	Canola	cytosol	68.86	70.09
CDX93275	Canola	cytosol	67.76	68.97
CDX93274	Canola	cytosol	33.11	67.11
CDY38589	Canola	cytosol	64.47	64.19
CDY44637	Canola	cytosol, mitochondrion, plastid	49.78	62.88
CDY06998	Canola	cytosol	28.07	61.54
CDX90860	Canola	cytosol	37.06	43.78
CDY20197	Canola	cytosol	19.52	43.2
CDY20195	Canola	cytosol	38.16	41.04
CDX82402	Canola	cytosol, plasma membrane	26.1	40.07
CDY28362	Canola	cytosol, nucleus, plastid	18.86	39.63
CDY02548	Canola	cytosol	37.72	39.54
CDY65744	Canola	peroxisome	24.56	39.44
CDX82401	Canola	cytosol	21.93	37.59
CDY59556	Canola	cytosol	36.4	37.14
CDY54394	Canola	cytosol	8.11	37.0
CDY21999	Canola	extracellular	14.04	36.99
CDY70857	Canola	cytosol	33.55	36.52
CDX75881	Canola	cytosol, extracellular, mitochondrion, plastid	16.67	36.36
CDX82963	Canola	cytosol	33.33	36.28
CDX79175	Canola	cytosol	23.46	35.2
CDX77840	Canola	cytosol	7.24	34.74
CDY46535	Canola	cytosol	29.17	34.55
CDY22879	Canola	cytosol	32.46	34.18
CDY53442	Canola	cytosol	29.39	33.92
CDY13177	Canola	extracellular	23.46	33.86
CDY68611	Canola	cytosol	19.52	33.58
CDY45640	Canola	cytosol	22.37	33.22
CDY53520	Canola	cytosol	21.27	33.11
CDY45301	Canola	cytosol	21.05	32.76
CDY32783	Canola	cytosol	37.28	32.5
CDY47758	Canola	cytosol	37.28	32.02
CDX75882	Canola	cytosol	19.96	31.82
CDY28360	Canola	cytosol	11.4	30.59
CDY69096	Canola	cytosol	38.38	29.91
CDY60590	Canola	cytosol	38.16	29.74
CDY72239	Canola	cytosol	19.52	28.62
CDY02565	Canola	cytoskeleton, cytosol, plasma membrane	35.09	28.42
CDX92074	Canola	cytosol	39.69	27.85
CDY40959	Canola	cytosol	30.92	27.65
CDY43099	Canola	cytosol	39.69	26.74
CDY43910	Canola	cytosol	41.01	25.2
CDY70821	Canola	cytosol	23.25	23.66
CDY63700	Canola	cytosol	27.41	21.37
CDX96652	Canola	extracellular	27.41	20.33
CDY59365	Canola	cytosol	35.31	20.18
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	6.58	20.13
CDY51196	Canola	cytosol	39.91	19.57
CDY02564	Canola	cytosol	40.13	19.55
CDY51197	Canola	cytosol	38.16	19.38
CDY22878	Canola	cytosol	41.01	19.04
CDX87871	Canola	cytosol	37.5	18.61
CDY48032	Canola	cytosol, extracellular, nucleus	9.21	18.26
CDY02563	Canola	cytosol, extracellular	39.91	17.17
CDY51195	Canola	cytosol, extracellular	39.69	17.01
CDY43090	Canola	cytosol	10.09	16.61
CDY47825	Canola	cytosol	28.73	16.52
CDX82115	Canola	extracellular	8.99	16.4
CDY47824	Canola	cytosol	11.62	14.85
CDY34134	Canola	cytosol	2.41	5.29

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EnsemblPlants:CDX93273	ProteinID:CDX93273	ProteinID:CDX93273.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00155231001	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom
InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	PFAM:PF01419	PFscan:PS51752	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208
SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EB7AFA	SEG:seg	:	:

Description

BnaC04g46230D

Coordinates

chrLK031875:+:681201..683523

Molecular Weight (calculated)

50445.3 Da

IEP (calculated)

4.896

GRAVY (calculated)

-0.380

Length

456 amino acids

Sequence
(BLAST)

001: MGKMYRKLAL RGGEGGREWD DDVYEGVKKV YVGQDLSRIT YIKFEYVKED GEVVTREYGT ITQDPREFII EYPDEHITAV EGSYNKVALI ATEVITSLVF
101: KTSKGRTSPT FGPNLFGVVN GTKFKFEDEG KKIVGFHGRS DNAIDALGVY LVLDSLTTPF PLYKLDAQGG TEGRVWDDGS FDGVRAVRVC QDDHRITYLE
201: FEYDKGGKSE KLHHGVKGGT SSEFVLDCPN EYIKSVEVTY DEPKLFQNTV ITSLTFQTSS GRTSFFGYKV GKKFVLEQKD HRLVGFHGKE GDAIDALGAY
301: FAPIQAPTPL IPTKKLPSVG GNGGVKWDDG VFDGVRKISI GQCYDVVSYV KFDYIKGTEL VSGDEHGETL PEASELVLED DEYLLSLGGY IDKSRGAIRY
401: IDAVKTNKRD SGESELNYGE KFTLGENGNK IVGFYGQASD VLHSIGVYVV PITSAE

Best Arabidopsis Sequence Match ( AT2G39310.1 )
(BLAST)

001: MAKMYRKLAL CGGEGGQEWD DDVYEGVRKV YVGQDLNRIT YIKFEYVQED GEVVTTEYGT TNQHPKEFVI QYPDEHIIAV EGSYHQVALI ATEVITSLVF
101: KTSKGRKSPL FGPNLLGITT GTKFVFEDEG KKIVGFHGRA GDAVDALGVY FVLDTTPFPL YKLDAQGGTD GRVWDDGSYD GIKTLRIDQD NSRITYLEVE
201: YEKDGEAKTC NHGGKGDTPS EFVLGYPDEY IKSVEATYQK PNIFSNTAIT SLKFLTSKGR TSFFGYNVGK KFVLEQKGHR LVGFHGKEDA AIDALGAYFG
301: PVPTPTPLIP SKKLPAIGGN EGVTWDDGVY DGVRKILVGQ GNDGVSFVKF EYSKGKDLVP GDDHGKKTLL GAEEFVLEDG EYLMNIDGYY DKIFGVEEPI
401: IVCLQFKTNK RESMPFGMDS GKKFSLGEEG HKIVGFHGQA SDVVHSIGVT IVPITTTE

Arabidopsis Description

JAL22Jacalin-related lectin 22 [Source:UniProtKB/Swiss-Prot;Acc:O80950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.