Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54394 | Canola | cytosol | 27.75 | 48.0 |
| CDY06998 | Canola | cytosol | 38.15 | 31.73 |
| CDX93274 | Canola | cytosol | 38.73 | 29.78 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 34.68 | 28.71 |
| CDY53520 | Canola | cytosol | 36.99 | 21.84 |
| CDY45301 | Canola | cytosol | 36.99 | 21.84 |
| CDX90860 | Canola | cytosol | 47.4 | 21.24 |
| CDX82402 | Canola | cytosol, plasma membrane | 36.42 | 21.21 |
| CDX82401 | Canola | cytosol | 31.79 | 20.68 |
| CDX77840 | Canola | cytosol | 9.83 | 17.89 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 15.03 | 17.45 |
| CDY72239 | Canola | cytosol | 30.64 | 17.04 |
| CDY20197 | Canola | cytosol | 20.23 | 16.99 |
| CDX79175 | Canola | cytosol | 28.9 | 16.45 |
| CDY45640 | Canola | cytosol | 28.9 | 16.29 |
| CDY20195 | Canola | cytosol | 39.31 | 16.04 |
| CDY69096 | Canola | cytosol | 52.6 | 15.56 |
| CDY13177 | Canola | extracellular | 28.32 | 15.51 |
| CDY59556 | Canola | cytosol | 39.88 | 15.44 |
| CDY60590 | Canola | cytosol | 52.02 | 15.38 |
| CDY68611 | Canola | cytosol | 23.12 | 15.09 |
| CDY07000 | Canola | cytosol | 38.15 | 14.93 |
| CDX74856 | Canola | cytosol | 38.73 | 14.57 |
| CDY24969 | Canola | cytosol | 36.99 | 14.1 |
| CDY07657 | Canola | cytosol | 36.99 | 14.1 |
| CDX93273 | Canola | cytosol | 36.99 | 14.04 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 28.32 | 13.57 |
| CDX82963 | Canola | cytosol | 31.79 | 13.13 |
| CDY70857 | Canola | cytosol | 31.79 | 13.13 |
| CDY02548 | Canola | cytosol | 32.95 | 13.1 |
| CDY38589 | Canola | cytosol | 34.68 | 13.1 |
| CDX75882 | Canola | cytosol | 21.39 | 12.94 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 16.18 | 12.9 |
| CDY70821 | Canola | cytosol | 32.37 | 12.5 |
| CDY28360 | Canola | cytosol | 12.14 | 12.35 |
| CDY06997 | Canola | cytosol | 30.64 | 11.83 |
| CDX92074 | Canola | cytosol | 42.77 | 11.38 |
| CDX93275 | Canola | cytosol | 29.48 | 11.38 |
| CDY43099 | Canola | cytosol | 43.93 | 11.23 |
| CDY43910 | Canola | cytosol | 45.09 | 10.51 |
| CDY22879 | Canola | cytosol | 26.01 | 10.39 |
| CDY40959 | Canola | cytosol | 28.32 | 9.61 |
| CDY32783 | Canola | cytosol | 28.9 | 9.56 |
| CDY47758 | Canola | cytosol | 28.9 | 9.42 |
| CDY63700 | Canola | cytosol | 30.06 | 8.89 |
| CDX96652 | Canola | extracellular | 30.64 | 8.62 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 27.75 | 8.53 |
| CDY59365 | Canola | cytosol | 36.99 | 8.02 |
| CDY65744 | Canola | peroxisome | 11.56 | 7.04 |
| CDX87871 | Canola | cytosol | 32.37 | 6.09 |
| CDY22878 | Canola | cytosol | 33.53 | 5.91 |
| CDY51197 | Canola | cytosol | 30.06 | 5.79 |
| CDY51196 | Canola | cytosol | 30.64 | 5.7 |
| CDY02564 | Canola | cytosol | 30.06 | 5.56 |
| CDY51195 | Canola | cytosol, extracellular | 32.95 | 5.36 |
| CDY02563 | Canola | cytosol, extracellular | 31.21 | 5.09 |
| CDX82115 | Canola | extracellular | 3.47 | 2.4 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 2.89 | 2.17 |
| CDY46535 | Canola | cytosol | 4.62 | 2.08 |
| CDY53442 | Canola | cytosol | 4.62 | 2.03 |
| CDY34134 | Canola | cytosol | 1.73 | 1.44 |
| CDY47824 | Canola | cytosol | 2.31 | 1.12 |
| CDY43090 | Canola | cytosol | 1.73 | 1.08 |
| CDY47825 | Canola | cytosol | 4.62 | 1.01 |
| CDY06999 | Canola | cytosol | 1.73 | 0.94 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | UniProt:A0A078G9E6 | EnsemblPlants:CDY21999 | ProteinID:CDY21999 | ProteinID:CDY21999.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00018346001 | InterPro:IPR001229 | InterPro:IPR036404 |
| InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 | PFscan:PS51752 | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | SMART:SM00915 | SUPFAM:SSF51101 | SignalP:SignalP-noTM | UniParc:UPI0004EE6D0E | SEG:seg |
Description
BnaC09g01050DBnaC09g01050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9E6]
Coordinates
chrLK032126:+:570617..571606
Molecular Weight (calculated)
19196.5 Da
IEP (calculated)
5.486
GRAVY (calculated)
-0.244
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSFNINYVF LVLIMSHYTL RALGAYYRPL PPPDTEKLEE QGGDGGDYWD DGNSFSGTRK IFIGLTENAI GFVKFMYVQN DSVIFGDDHG SKTLSDVQEF
101: TLSDPAEYLT SVEGAYDDKS GVITTTSNKN SRAFGFSTTS TFTLHKDGHK IVGFHGKSSY MLHQIGVHVL PIP
101: TLSDPAEYLT SVEGAYDDKS GVITTTSNKN SRAFGFSTTS TFTLHKDGHK IVGFHGKSSY MLHQIGVHVL PIP
001: MAQRLEAEGN KNFKGKSKWD DGSDKDDIGK ISVRCEDGGI TYIRFDYIKS GQPQYNTFPG NPGRGILQTF DINHKNDEHL ESVEGYYDPK SDAIKGLQFK
101: TNMRISELIG YANDGATKFS LAVEGKKIIG FHGAYNTYLN SLGAYVTWIV PTKLKAKGGK GGKEWNDGAD HEGITKIYVR GGYEGLQYVK FDYIKDGQQI
201: YGSPHGVRGR GFTELFEINH LDKEYLISVE GYYDEGESGV IQGIQFKTNI RTSELMGDNR GRKFSLAANG KKIIGFHGYA EKNLNSLGAY FTTSPFTKLE
301: VGTTSADLWD DGTFDGIRNV YIHYDGDAVC CVEVDYDNKG KVEKREHGIM IAPFIERGEF VVDYPNEFIT SVEVTISKQN DSPVPSLTSE TVASLTFKTS
401: KGRTSSTFGS PATKKFVLQS KGCGVVGFLG RSSYYTYALG AHFCPLPPLP DGEKVEAKGG DGGASWDDGR FDCIRKIYIG HSEMGIAFVK FLYDKDNKVV
501: VGDDHGSKTL LGVDEFELEH PDEYLISVEG SYDVVDGSES EVIRMLRFKT NMRTSQLFGH ETTSNFTLQK ECHKIVGFHG KIGEMLHQIG VHVLPITD
101: TNMRISELIG YANDGATKFS LAVEGKKIIG FHGAYNTYLN SLGAYVTWIV PTKLKAKGGK GGKEWNDGAD HEGITKIYVR GGYEGLQYVK FDYIKDGQQI
201: YGSPHGVRGR GFTELFEINH LDKEYLISVE GYYDEGESGV IQGIQFKTNI RTSELMGDNR GRKFSLAANG KKIIGFHGYA EKNLNSLGAY FTTSPFTKLE
301: VGTTSADLWD DGTFDGIRNV YIHYDGDAVC CVEVDYDNKG KVEKREHGIM IAPFIERGEF VVDYPNEFIT SVEVTISKQN DSPVPSLTSE TVASLTFKTS
401: KGRTSSTFGS PATKKFVLQS KGCGVVGFLG RSSYYTYALG AHFCPLPPLP DGEKVEAKGG DGGASWDDGR FDCIRKIYIG HSEMGIAFVK FLYDKDNKVV
501: VGDDHGSKTL LGVDEFELEH PDEYLISVEG SYDVVDGSES EVIRMLRFKT NMRTSQLFGH ETTSNFTLQK ECHKIVGFHG KIGEMLHQIG VHVLPITD
Arabidopsis Description
Mannose-binding lectin superfamily protein [Source:TAIR;Acc:AT1G60110]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.