Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G16450.2 | Thale cress | cytosol | 55.88 | 31.67 |
| CDY54394 | Canola | cytosol | 14.12 | 24.0 |
| CDX82402 | Canola | cytosol, plasma membrane | 38.82 | 22.22 |
| CDX82401 | Canola | cytosol | 33.53 | 21.43 |
| CDY20197 | Canola | cytosol | 25.88 | 21.36 |
| CDX75881 | Canola | cytosol, extracellular, mitochondrion, plastid | 22.94 | 18.66 |
| CDY28362 | Canola | cytosol, nucleus, plastid | 21.18 | 16.59 |
| CDX93274 | Canola | cytosol | 21.18 | 16.0 |
| CDX75882 | Canola | cytosol | 25.88 | 15.38 |
| CDY06998 | Canola | cytosol | 18.82 | 15.38 |
| CDY53520 | Canola | cytosol | 26.47 | 15.36 |
| CDY45301 | Canola | cytosol | 25.88 | 15.02 |
| CDY20195 | Canola | cytosol | 37.06 | 14.86 |
| CDY13177 | Canola | extracellular | 27.06 | 14.56 |
| CDY48032 | Canola | cytosol, extracellular, nucleus | 19.41 | 14.35 |
| CDY02548 | Canola | cytosol | 35.88 | 14.02 |
| CDX74856 | Canola | cytosol | 37.65 | 13.91 |
| CDY07657 | Canola | cytosol | 36.47 | 13.66 |
| CDY24969 | Canola | cytosol | 35.88 | 13.44 |
| CDY65744 | Canola | peroxisome | 21.76 | 13.03 |
| CDY59556 | Canola | cytosol | 34.12 | 12.98 |
| CDY22879 | Canola | cytosol | 32.94 | 12.93 |
| CDX82115 | Canola | extracellular | 18.82 | 12.8 |
| CDY21999 | Canola | extracellular | 12.35 | 12.14 |
| CDY38589 | Canola | cytosol | 32.35 | 12.01 |
| CDX90860 | Canola | cytosol | 26.47 | 11.66 |
| CDY06999 | Canola | cytosol | 21.76 | 11.64 |
| CDY07000 | Canola | cytosol | 30.0 | 11.54 |
| CDX93273 | Canola | cytosol | 30.59 | 11.4 |
| CDY06997 | Canola | cytosol | 29.41 | 11.16 |
| CDX93275 | Canola | cytosol | 28.24 | 10.71 |
| CDX77840 | Canola | cytosol | 5.88 | 10.53 |
| CDY40959 | Canola | cytosol | 31.18 | 10.39 |
| CDX92074 | Canola | cytosol | 39.41 | 10.31 |
| CDY47758 | Canola | cytosol | 31.76 | 10.17 |
| CDY32783 | Canola | cytosol | 31.18 | 10.13 |
| CDY69096 | Canola | cytosol | 34.12 | 9.91 |
| CDY43099 | Canola | cytosol | 39.41 | 9.9 |
| CDY43090 | Canola | cytosol | 15.88 | 9.75 |
| CDY60590 | Canola | cytosol | 33.53 | 9.74 |
| CDY46535 | Canola | cytosol | 20.59 | 9.09 |
| CDY44637 | Canola | cytosol, mitochondrion, plastid | 18.82 | 8.86 |
| CDY53442 | Canola | cytosol | 20.59 | 8.86 |
| CDY70857 | Canola | cytosol | 21.76 | 8.83 |
| CDY45640 | Canola | cytosol | 15.88 | 8.79 |
| CDY72239 | Canola | cytosol | 15.88 | 8.68 |
| CDY43910 | Canola | cytosol | 37.06 | 8.49 |
| CDX82963 | Canola | cytosol | 20.59 | 8.35 |
| CDY63700 | Canola | cytosol | 28.24 | 8.21 |
| CDX96652 | Canola | extracellular | 28.82 | 7.97 |
| CDY02565 | Canola | cytoskeleton, cytosol, plasma membrane | 25.29 | 7.64 |
| CDY47824 | Canola | cytosol | 14.71 | 7.0 |
| CDX79175 | Canola | cytosol | 12.35 | 6.91 |
| CDY59365 | Canola | cytosol | 31.18 | 6.64 |
| CDY68611 | Canola | cytosol | 10.0 | 6.42 |
| CDY70821 | Canola | cytosol | 16.47 | 6.25 |
| CDY51196 | Canola | cytosol | 33.53 | 6.13 |
| CDY51197 | Canola | cytosol | 31.76 | 6.01 |
| CDY02564 | Canola | cytosol | 32.94 | 5.98 |
| CDY34134 | Canola | cytosol | 7.06 | 5.77 |
| CDX87871 | Canola | cytosol | 30.59 | 5.66 |
| CDY02563 | Canola | cytosol, extracellular | 34.71 | 5.57 |
| CDY51195 | Canola | cytosol, extracellular | 33.53 | 5.36 |
| CDY22878 | Canola | cytosol | 28.24 | 4.89 |
| CDY47825 | Canola | cytosol | 20.59 | 4.41 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 3.53 | 4.03 |
Protein Annotations
| Gene3D:2.100.10.30 | MapMan:35.1 | UniProt:A0A078GP66 | EnsemblPlants:CDY28360 | ProteinID:CDY28360 | ProteinID:CDY28360.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009409 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0010043 | EnsemblPlantsGene:GSBRNA2T00040157001 | InterPro:IPR001229 |
| InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 | PFscan:PS51752 | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0004EEABE1 | SEG:seg | : |
Description
BnaC01g35300DBnaC01g35300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GP66]
Coordinates
chrLK032218:-:250518..260461
Molecular Weight (calculated)
18873.2 Da
IEP (calculated)
6.117
GRAVY (calculated)
-0.395
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKVEAQGG LGGDVWDDGV YDGVRKEVEG GEHGNKTLLG FEFEVDADDY IISVQAVNKI FGHESDVITS ITFYIFKGKA SPPYGLETEK KKVFVGQAQD
101: GISVVNLYLT IRVSTSRRYH RSDSEVVTML RFKTNKQTSA PFGIEAGTQR VKFQDLRTDS SVWSPCLSNH
101: GISVVNLYLT IRVSTSRRYH RSDSEVVTML RFKTNKQTSA PFGIEAGTQR VKFQDLRTDS SVWSPCLSNH
001: MDHSTLSIYL LSGNSKDIKS KQKMAQKVEA QGGIGGDVWD DGAHDGVRKV HVGQGLDGVS FINVVYENGS QEVVGGEHGK KSLIGIETFE VDADDYIVAV
101: QVTYDKIFGY DSDIITSITF STFKGKTSPP YGLDTENKFV LKEKNGGKLV GFHGRAGEIL YALGAYFTTT TTPLTPAKKL PAVGGDEGTA WDDGAFDGVK
201: KVYIGQAQDG ISAVKFVYDK GAEDIVGDEH GNDTLLGFEE FQLDYPSEYI TAVEGTYDKI FGFETEVINM LRFKTNKKTS PPFGIEAGTA FELKEEGCKI
301: VGFHGKVSAV LHQFGVHILP VTN
101: QVTYDKIFGY DSDIITSITF STFKGKTSPP YGLDTENKFV LKEKNGGKLV GFHGRAGEIL YALGAYFTTT TTPLTPAKKL PAVGGDEGTA WDDGAFDGVK
201: KVYIGQAQDG ISAVKFVYDK GAEDIVGDEH GNDTLLGFEE FQLDYPSEYI TAVEGTYDKI FGFETEVINM LRFKTNKKTS PPFGIEAGTA FELKEEGCKI
301: VGFHGKVSAV LHQFGVHILP VTN
Arabidopsis Description
ATMLP-300BMyrosinase-binding protein-like protein-300B [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.